Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0411 ATGTGGTCTGGTGGAGGGTCGTCTAGGTCACTCAACTTCGGCCATTCTGAGATGGGCATGGTCGGCCTTCGAGATGTCTTCGTGGTGGCGCCTGCTTCTTCCTACCACCACCATCATAACGACATCGTCATGGCCGATCCTCATCACAACGCCGCCACCATCCACGGCGTTATTCCTCTCCTAACGGCAGCTCCTTGTCTCGACGGTGACACAAGCAACATGCTCAATCTCAGCAGCCATAATAATAACCGAAGCCGTAACACCGGAATTCAGTTTTGGCAGGATCATTACTTGAAGAAGCAAGGCCTTAACCCCGAACACGGCAATGGTACGACGACCTCTGGCAACCTAGCTCACAGCGGCGGCGGGTTAAGCGGTGGCTCGGCTTTGAGCTCAGGAGGAACAACGTGCCAAGACTGTGGCAATCAGGCCAAGAAAGATTGTAGTCATAGAAGGTGTAGAACTTGCTGTAAGAGCCGAGGTTTTGATTGCCCTACTCACGTGAAAAGCACTTGGGTATCCGCTGCTCGTCGAAGGGAACGCCAGCTTTTTGCCGCTGCCGCCTCATCCGGAGGTGGTGGTGGTGGGTTTAGTGGGGCTACCTCAGTTTCCAAGAAACCTAGACTCGTCGGCTCACAAACCACCACGACCTCTCGTACTTCTACTTCCAACACAACTCCTCCTCGAAGCTTCGAAACTAGCTCTAGCCATCAAGATGCGAGTTTCAAAGAATCACTGCCAGGTCAAGTACGTGCGCCGGCGGTGTTCAAGTGCGTTCGTGTGACGGCGGTGGCTGACGGGGACGATGAGTATGCTTATCAAGCGGTTGTGAAGATTGGTGGCCATGTGTTCAAAGGGTTTTTGTATGATCAAGGGGTTGAAAATGGAGATGGCTATCCTAACCTCTCTGAGCTGCATTTGGGCGGCGGCGGGAACGGCGGAACAAGTGGTGGTGGTGCCGGAAGAAATGGAGCTACTTCATCTTCCCTAATGCTTGATCCTTCTGATTTATATGCTGCTGCTTCAGGTGGGGCTATACTTGCCGGTTCAACATATGGTAATGCCATAAATTGA 1074 0.5261 MWSGGGSSRSLNFGHSEMGMVGLRDVFVVAPASSYHHHHNDIVMADPHHNAATIHGVIPLLTAAPCLDGDTSNMLNLSSHNNNRSRNTGIQFWQDHYLKKQGLNPEHGNGTTTSGNLAHSGGGLSGGSALSSGGTTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVKSTWVSAARRRERQLFAAAASSGGGGGGFSGATSVSKKPRLVGSQTTTTSRTSTSNTTPPRSFETSSSHQDASFKESLPGQVRAPAVFKCVRVTAVADGDDEYAYQAVVKIGGHVFKGFLYDQGVENGDGYPNLSELHLGGGGNGGTSGGGAGRNGATSSSLMLDPSDLYAAASGGAILAGSTYGNAIN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0411 357 MobiDBLite consensus disorder prediction 105 125 - -
Acco05g0411 357 MobiDBLite consensus disorder prediction 205 243 - -
Acco05g0411 357 Pfam Domain of unknown function (DUF702) 134 294 - -
Acco05g0411 357 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 66 340 IPR007818 GO:0003700|GO:0006355
Acco05g0411 357 MobiDBLite consensus disorder prediction 101 125 - -
Acco05g0411 357 NCBIfam LRP1 C-terminal domain 246 293 IPR006511 -
Acco05g0411 357 MobiDBLite consensus disorder prediction 186 245 - -
Acco05g0411 357 NCBIfam putative zinc finger domain, LRP1 type 136 178 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0411 Acco-ChrAcco05 5150811 5152187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0411 16 337 C2H2 Transcription Factor Family AT5G12330 52.252 3.55e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco05g0411 DUF702 4.2e-61 No_clan