Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0405 ATGACAGTCATGGAAGAATCAGGCGAATTGCAATCGGAAGAGAATAAAGTTTCTATCGAGAAAAATAGGAAAAGGAGGCTTAAAACACCAGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCGGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACTTGTGCTAATGGGCGACAAGATCGCTCAAGTGGCGTTGTCCAGGACCATGTTAGTGGACTAAGGCAAGATTCATGTGGAAGCACTAAACATGGTGATAATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCTTCTATGGCAATGACTTTTCTGTTGCAGATATGACATATGAACGTAATAGAGATTATAATGAAGATGTTGATGGAATGGATAACACATCTTCTGAGAGTAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATATGGAGCCTTCTAGATATCTGACACCTAACAGAGCTCTGCCACCTTTGGTTCCCAAAGCTGCAATTAACATAGGATATAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCTACTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATAGGGAAGATGGTCCCCTTCTTAGTGTGGAATTTGATCCAGTTCCTCCTGGGGCTTTTGAGTGCCAAATTGCAGCAGATCCAGTTGATGAATCATTGCAATTCCATACTGTGAATCCTTCTCTTCCCAGTCCTCCAGAAATTTCTGCCGTGAAAAGGCAACCTGCCCTTAACTCTAGGTATGACTCCAAATATGGTTCCCATGATTTAGATATGGAAGTGGGAGAACTTGGCTCCTTGCATGACACTGACTTGCTGGATAGAAAACCTCGCCAGCACAAGCAAGGGCGGATGTTTCAGAGTTATACCAATCATTTACCTCATAGGAACTCGCCCCTGGAGTTGTATGAAGATCCCACTGGAGCAGTGCCTGCCTATAATACAATGGGCTCTAAGCACGGTGAAGGGATGAGATCTGATTCCGCTTCTTACCAGAGTGATCACTTTGAAGAGGACCTTGTGGCTAAGCAGATAGATTCACTTCTGCATTGCTATGATGATGTCAATCCAAAGAAAATTCAGAGGAGTGAGCATATAAAATCTAAGCCTTCAAAGTCATCAAAAAATTCTCGCATTTCTCTTGATACTGAAGAAAGAGGACTATCTTCAAGGATAGCAAAGGAAGAGAAGTTTGGTGGGGGCAAGAAGGCAAGAAAACAATACCATGATTCAGAGAGAATAAAGATTCTTCCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACAAAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATACTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACCAGTTATTCGCTGGACTAA 1560 0.4135 MTVMEESGELQSEENKVSIEKNRKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVVQDHVSGLRQDSCGSTKHGDNKHLDLKEVESHGFYGNDFSVADMTYERNRDYNEDVDGMDNTSSESSSSLQDQLFSQGQDPYNMEPSRYLTPNRALPPLVPKAAINIGYKPSGYLKVKGEIENATITAVKKQLGRNYREDGPLLSVEFDPVPPGAFECQIAADPVDESLQFHTVNPSLPSPPEISAVKRQPALNSRYDSKYGSHDLDMEVGELGSLHDTDLLDRKPRQHKQGRMFQSYTNHLPHRNSPLELYEDPTGAVPAYNTMGSKHGEGMRSDSASYQSDHFEEDLVAKQIDSLLHCYDDVNPKKIQRSEHIKSKPSKSSKNSRISLDTEERGLSSRIAKEEKFGGGKKARKQYHDSERIKILPNETMIAKRVKDDLPQQQNLKHALVAEMQPQKNRRSATEILSSFSEDETAETSYSLD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0405 519 MobiDBLite consensus disorder prediction 89 110 - -
Acco05g0405 519 SMART HOX_1 21 83 IPR001356 GO:0003677
Acco05g0405 519 MobiDBLite consensus disorder prediction 9 23 - -
Acco05g0405 519 CDD homeodomain 23 78 IPR001356 GO:0003677
Acco05g0405 519 MobiDBLite consensus disorder prediction 405 435 - -
Acco05g0405 519 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Acco05g0405 519 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Acco05g0405 519 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Acco05g0405 519 Coils Coil 517 519 - -
Acco05g0405 519 MobiDBLite consensus disorder prediction 148 174 - -
Acco05g0405 519 Gene3D - 11 95 - -
Acco05g0405 519 MobiDBLite consensus disorder prediction 155 174 - -
Acco05g0405 519 MobiDBLite consensus disorder prediction 1 23 - -
Acco05g0405 519 MobiDBLite consensus disorder prediction 83 116 - -
Acco05g0405 519 MobiDBLite consensus disorder prediction 493 519 - -
Acco05g0405 519 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 519 - -
Acco05g0405 519 MobiDBLite consensus disorder prediction 487 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0405 Acco-ChrAcco05 5035036 5042299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0405 6 519 Homeobox Transcription Factor Family AT4G03250 39.633 4.60e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Acco05g0405 Homeodomain 7.7e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0405 05 5035036 5042299 Acco05g0405 05 5035036 5042299 ECH