Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0383 ATGAATATCCCAACAACGGCTTCTTCTTCTTCCATGGCTTCTCTGTTCTTTCACTCCCTTTTTCTTCTTCTCTGTCTCACTGCCTCTTGTTCTTCTTCTACTTCTGTTTCATCACTTCCTCTCTTGTCTCTCAAAAGGCAAGCTTCAATCTTGGTTTCTCTCAGACAAGGTTTTCAACCTCAAAATTCTTCTCTTGAATCCTGGGACGTGTCTAATTATCTGTCCCTCTGTTCTTGGGATGGCATCCAATGTGACCATAGCAACAGGTCTGTGGTTTCCTTTGACATATCCAATTACAACTTTTCTGGGTTTCTTTCCCCTGTCATCGCCGAGCTCCGGGGACTTGCGTCTATCTCTGTCGCCGATAACAGCTTTTCCGGCGAGCTCCCTCCGGAGATTCTCCGGCTTCCCGACCTGCGGTTCCTCAACATATCCAACAACATGTTCACTGGGAATCTTAGTTGGGATTTCTCCGACATGAGTGAGCTTGAGGTTCTTGATGCTTATGACAACGACTTTAACGGCGAACTACCTCTCGGAGTCACCAACCTTCCCAAGCTCAGGCACTTGAATTTTGGCGGGAATTTCTTCTCCGGGAGAATCCCAGAAGACTATGGGAAAATGGTGGGCTTGAATTTTCTCTCCCTTGCTGGGAATGATCTAAGTGGGTTTATACCCAGTGAGCTTGGGAATCTTACAAATTTGACCCATTTATATTTGGGGTATTTCAACAAGTTTGATGGTGGAATCCCAAGTGAGTTTGGGAATTTAATCAATTTGGTTCATATAGACCTTGCAAATTGTAGCTTGAATGGTACAATCCCTTCAGAATTAGGCAAGCTCTCAAAAGTAGACACTCTTTTCTTGCAAACCAATCAGCTTACTGGTTCAATCCCACATCATATTGGCAATTTGAGCAACTTGAGATCTCTTGATCTTTCCAACAATGAGCTAATTGGAGAAATCCCATTTGAGCTCTCAAACCTCCAAGAGCTCACACTCCTCAATTTATTCATCAACAAATTGCATGGTGAGATTCCTCAGTTCATCTCTGAGCTCCCAAAACTTGAAACTTTACATCTATGGAAGAACAACTTCACTGGTTCAATCCCTCCTGGGCTTGGCCGGAATGGGAAATTAATTGAGCTTGATCTTTCATCAAATAAACTTACTGGGTTAGTCCCAAAATCTCTTTGCCTTGGCAAGAAGCTCAAGATCTTAATCTTGCTCAACAATTTTCTCTTTGGATCTTTGCCTGATGACCTTGGAGAATGCTACACACTTCAAAGAGTTCGCTTGGGTCAGAACTATTTAACAGGAAAAATACCAAATGGGTTTCTTTATCTGCCTGAACTTTTACTTCTTGAGCTGCAGAACAACTATCTCACTGGTGTTCTTCCTCAAGACTCAGCCAATTCAACATCAAAACTAGAGCAGTTGAATCTATCAAACAATCGTCTGTCCGGGTCTCTCCCAGAATCAATTGGGAATTTCCCAAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGGAGGAATTCCACCAGATATAGGCAGGTTGAAGAATCTGTTAAAGTTGGATATGAGCAGAAACAACATATCAGGTGGTATTCCTTCAGAGATAGGGAACTGTGATTTGCTCACATTCTTAGACTTAAGCCAGAACCAACTTTCAGGTCCCATACCTGTTCAAATTTCCCAAATTCACATCTTGAACTATCTTAATGTCTCAAGGAACAACCTGAACCACAGCCTCCCAAAAGAACTAGGTACCATGAAAGGGTTAACCTCAACGGATTTCTCTCACAACAACTTCTCTGGTTCAATTCCAGATGTTGGGATGTTCACAGTCTTGAACTCATCCTTCTTTCAGGGAAACCCAAATCTATGTGGGTATGATCTAAACCCATGTGGAACTCATTCATCAAACTCACTTTCAGACTCTCATGAGACTGACAATACAAAATCTGGAGTTCCTGGGAAGTACAAGTTTCTTTTTGCGCTTGCACTACTGGGATGCTCATTAATTTTTGCAGCCTTAGCTATCATCAAAAGCAGAAAGAAGGCAAGGAGGAATTCAAATTCATGGAAGCTCACAGCATTTCAAAAGCTAGAATATGGGAGTCAAGACATATTGGGATGCATAAAGGAGAGCAATGTGATAGGAAGAGGAGGTGCTGGGATTGTGTACAGAGGCACCATGCCAAATGGTGAGGAACTAGCAGTGAAGAAGCTCTTGGGATTCAATAAAGGCTCTTCTCATCATGACAATGGCTTATCTGCAGAAATAAGAACATTGGGGAGGATAAGGCACAGGTACATTGTGAGATTACTAGCTTTTGTCACAAATAGAGACACAAATTTGCTTGTGTATGAGTACATGCCAAATGGGAGCTTGGGCGGAGTGCTTCATGGTAAGAGAGGCGAGTTCTTGAAGTGGGAAACAAGGCTTAAGATTGCCATTGAAGCAGCAAAAGGGCTTTCTTATCTACACCATGATTGTTCACCACTTATAATACATAGAGATGTGAAGTCTAATAACATATTGTTAAATTCTGAGTTTGAGGCTCATGTGGCTGACTTTGGACTTGCCAAGTTCTTGCAAGACACTGGTACATCAGAATGCATGTCTTCCATTGCTGGCTCTTATGGTTACATTGCTCCAGAGTATGCGTACACGTTAAAAGTTGATGAGAAGAGTGATGTTTATAGCTTCGGGGTGGTACTGCTGGAACTCTTGACGGGTAGACGGCCAGTGGGGGATTTTGGAGAAGAAGGAATAGACATTGTTCAGTGGACAAAGATGCAAACTAACTGGAGCAAAGACAAGGTGGTGGGGGTTCTTGATGAGAGGCTGCAAAATAGTAGTATTCCTATAGATGAAGCAAAACAAATGTTCTTTGTGGCCATGCTCTGTGTTCAAGAACACAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTGGTACAAGCAAAGCAGCCCAGTACATTTTAA 3006 0.4245 MNIPTTASSSSMASLFFHSLFLLLCLTASCSSSTSVSSLPLLSLKRQASILVSLRQGFQPQNSSLESWDVSNYLSLCSWDGIQCDHSNRSVVSFDISNYNFSGFLSPVIAELRGLASISVADNSFSGELPPEILRLPDLRFLNISNNMFTGNLSWDFSDMSELEVLDAYDNDFNGELPLGVTNLPKLRHLNFGGNFFSGRIPEDYGKMVGLNFLSLAGNDLSGFIPSELGNLTNLTHLYLGYFNKFDGGIPSEFGNLINLVHIDLANCSLNGTIPSELGKLSKVDTLFLQTNQLTGSIPHHIGNLSNLRSLDLSNNELIGEIPFELSNLQELTLLNLFINKLHGEIPQFISELPKLETLHLWKNNFTGSIPPGLGRNGKLIELDLSSNKLTGLVPKSLCLGKKLKILILLNNFLFGSLPDDLGECYTLQRVRLGQNYLTGKIPNGFLYLPELLLLELQNNYLTGVLPQDSANSTSKLEQLNLSNNRLSGSLPESIGNFPNLQNLLLSENRFSGGIPPDIGRLKNLLKLDMSRNNISGGIPSEIGNCDLLTFLDLSQNQLSGPIPVQISQIHILNYLNVSRNNLNHSLPKELGTMKGLTSTDFSHNNFSGSIPDVGMFTVLNSSFFQGNPNLCGYDLNPCGTHSSNSLSDSHETDNTKSGVPGKYKFLFALALLGCSLIFAALAIIKSRKKARRNSNSWKLTAFQKLEYGSQDILGCIKESNVIGRGGAGIVYRGTMPNGEELAVKKLLGFNKGSSHHDNGLSAEIRTLGRIRHRYIVRLLAFVTNRDTNLLVYEYMPNGSLGGVLHGKRGEFLKWETRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKMQTNWSKDKVVGVLDERLQNSSIPIDEAKQMFFVAMLCVQEHSVERPTMREVVEMLVQAKQPSTF 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0383 1001 Gene3D Ribonuclease Inhibitor 46 155 IPR032675 -
Acco05g0383 1001 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 357 643 - -
Acco05g0383 1001 SUPERFAMILY Protein kinase-like (PK-like) 712 993 IPR011009 -
Acco05g0383 1001 Gene3D Ribonuclease Inhibitor 242 398 IPR032675 -
Acco05g0383 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Acco05g0383 1001 Gene3D Phosphorylase Kinase; domain 1 686 795 - -
Acco05g0383 1001 FunFam Leucine-rich repeat receptor-like protein kinase 44 203 - -
Acco05g0383 1001 ProSiteProfiles Leucine-rich repeat profile. 379 400 IPR001611 GO:0005515
Acco05g0383 1001 SMART LRR_typ_2 522 546 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 257 281 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 305 329 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 474 498 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 208 232 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 353 377 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 449 472 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 136 159 IPR003591 -
Acco05g0383 1001 SMART LRR_typ_2 378 400 IPR003591 -
Acco05g0383 1001 ProSiteProfiles Leucine-rich repeat profile. 307 330 IPR001611 GO:0005515
Acco05g0383 1001 PRINTS Leucine-rich repeat signature 380 393 - -
Acco05g0383 1001 PRINTS Leucine-rich repeat signature 474 487 - -
Acco05g0383 1001 ProSiteProfiles Leucine-rich repeat profile. 476 498 IPR001611 GO:0005515
Acco05g0383 1001 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 245 350 - -
Acco05g0383 1001 SMART serkin_6 717 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0383 1001 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1001 - -
Acco05g0383 1001 Pfam Leucine rich repeat 455 511 IPR001611 GO:0005515
Acco05g0383 1001 Pfam Leucine rich repeat N-terminal domain 45 85 IPR013210 -
Acco05g0383 1001 SUPERFAMILY L domain-like 322 657 - -
Acco05g0383 1001 Gene3D Transferase(Phosphotransferase) domain 1 796 1000 - -
Acco05g0383 1001 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 211 993 - -
Acco05g0383 1001 Pfam Protein kinase domain 719 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0383 1001 Gene3D Ribonuclease Inhibitor 156 241 IPR032675 -
Acco05g0383 1001 ProSiteProfiles Protein kinase domain profile. 717 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0383 1001 Pfam Leucine Rich Repeat 307 329 IPR001611 GO:0005515
Acco05g0383 1001 Pfam Leucine Rich Repeat 379 399 IPR001611 GO:0005515
Acco05g0383 1001 Gene3D Ribonuclease Inhibitor 399 640 IPR032675 -
Acco05g0383 1001 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 686 795 - -
Acco05g0383 1001 SUPERFAMILY L domain-like 72 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0383 Acco-ChrAcco05 4814530 4826459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0383 32 994 Receptor kinase-like Gene Family AT5G65700 57.513 0.0 1082
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco05g0383 Pkinase 2.6e-44 CL0016