Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0363 ATGGGACCAGATCAAGAACTTGTAGAGATCCTTTGGGAAAAAGGACAGGTAGTTTTGAACAGCCAAACACATAGGAAACCATTTTTGAATTCAGTACACTCAAAGCAAGTTCAGAATAATGATCAAACAACATTGAGGACTAGTGGATTATATGGGAGCTCGAGTCATAATTTGTTTCAAGAAGATGAGACAGTCTCATGGATCCAGTACCCACTAGAAAATCCATTGGAACAAGAATTATGTTCAGACTTTTTACCTGAACTTCCATCTTGTGAGATTGAACCTGATAAGCCAAATAAGCAGTTTGAAGAAGATAAGTTCGCCAAATTCACTACCGACAGCGCCTCCCATCTGACTGCAACTTCACAACCTCCTAATATGAAACTGTCCTCTGTTGAGAAATTCTCAGGAAATCCCATACTTTCTCCTAGATTTTTTCCTGATTCATCTCAGAAAAATGTTGACTTTAACGGGTCGTCAAAAGTCCTCAATTTCTCTCATTTCTCAGCAGTTCCTAAGGTTGTTTCAGCATCTTCTAATGCACGACATGGAGAAAAAGGTACAGGTAATATGTTGCAAAATGAGGCTGGAGAGGGCTCAGTGATGACAGTTGGTTCAAGTCATTGTGGCAGCAATCAAATTCCTCGAGACCGATATGTGAGCAGGATTTTGAGCAATGGTGTTTGGACTACTACTAGTTTGTCAGCAGAGCCTTCTTCCTTAAAGGATAATAACGTTCACAAAAAACTTCCAATGGATGAAAATGGGAAACCAGAAACACATGAACCAACTGTCACTTCATCTTCTGGGGGCTCAGGAAGTAGTCTTGAAAAAACTTGTTCCCGCTCTACTAGTATCAGTAGCCAGAAAAGAAAAGGGACAGATTCAGAAGAGTTAGAGAAACAAAGTGAGACCACAGAACTCCAATCAGTAGCTAGAAACAAGGCTCAGAGGACAGGGTCTTCCCAAAGGAACCGTGCTGCTGAAATTCATAATCTCTCAGAAAGGAGACGAAGAGACAGGATCAATGAGAAGATGAAGGCGTTGCAAAAACTCATACCTCACAGTAACAAGACAGACAAAGCATCAATGCTAGATGAGGCAATAGAATATTTGAAATCACTTCAGTTTCAGCTTCAGATGATGTTGATGGGAGCTGGCATGGCGCCAGTGATGATTCCAGGAATTCAGCACTACATGTCTCAAATGGGTATGGGATTGGCATCACCTTCTCTGTCTAATCATATGAATATAACGCGAGTTCCACTCGACCAATCCATATCTATGTCTCAAGCACCAAATCAGACTGCAACATTTCAAGCTCCCATTCTGGGTCCCTTCAATTACCAAAGTCATATGCAAAATACATGTCTTTCTGAGCAATATGCACGCTGCATGGGCTATCATCTTATGCAAAGTGCTTCTCAGTCAATGAATGCATTTAGTTATGGTTCCCAGGCAGTACAACACAGTCAAACAATGATTCCACCCAGCAATAGCAATGGACCCCCTAGTGGAGCAGCTAATACCAATGATGCTGTCGGTGGAAGGATGGGCAAGCCAAATTAA 1569 0.4162 MGPDQELVEILWEKGQVVLNSQTHRKPFLNSVHSKQVQNNDQTTLRTSGLYGSSSHNLFQEDETVSWIQYPLENPLEQELCSDFLPELPSCEIEPDKPNKQFEEDKFAKFTTDSASHLTATSQPPNMKLSSVEKFSGNPILSPRFFPDSSQKNVDFNGSSKVLNFSHFSAVPKVVSASSNARHGEKGTGNMLQNEAGEGSVMTVGSSHCGSNQIPRDRYVSRILSNGVWTTTSLSAEPSSLKDNNVHKKLPMDENGKPETHEPTVTSSSGGSGSSLEKTCSRSTSISSQKRKGTDSEELEKQSETTELQSVARNKAQRTGSSQRNRAAEIHNLSERRRRDRINEKMKALQKLIPHSNKTDKASMLDEAIEYLKSLQFQLQMMLMGAGMAPVMIPGIQHYMSQMGMGLASPSLSNHMNITRVPLDQSISMSQAPNQTATFQAPILGPFNYQSHMQNTCLSEQYARCMGYHLMQSASQSMNAFSYGSQAVQHSQTMIPPSNSNGPPSGAANTNDAVGGRMGKPN 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0363 522 MobiDBLite consensus disorder prediction 235 338 - -
Acco05g0363 522 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Acco05g0363 522 CDD bHLH_AtPIF_like 326 389 IPR047265 -
Acco05g0363 522 MobiDBLite consensus disorder prediction 261 290 - -
Acco05g0363 522 Pfam Helix-loop-helix DNA-binding domain 331 376 IPR011598 GO:0046983
Acco05g0363 522 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 389 IPR036638 GO:0046983
Acco05g0363 522 MobiDBLite consensus disorder prediction 489 522 - -
Acco05g0363 522 FunFam Basic helix-loop-helix transcription factor 321 384 - -
Acco05g0363 522 SMART finulus 332 381 IPR011598 GO:0046983
Acco05g0363 522 Gene3D - 321 383 IPR036638 GO:0046983
Acco05g0363 522 MobiDBLite consensus disorder prediction 242 260 - -
Acco05g0363 522 MobiDBLite consensus disorder prediction 489 508 - -
Acco05g0363 522 PANTHER TRANSCRIPTION FACTOR PIF3 2 496 IPR044273 GO:0003700|GO:0006355
Acco05g0363 522 MobiDBLite consensus disorder prediction 305 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0363 Acco-ChrAcco05 4544074 4546776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0363 1 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 33.010 1.62e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco05g0363 HLH 3.2e-14 No_clan