Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0338 ATGGAAGTGATGGGCAAGCTTAAAGTTAGGTTATCATCATCAGAAGAAGAGGAAGGAGAAGTGATGGCTCCTGGGTTTAGATTCTATCCCACAGATGAAGAACTTGTAGGGTTTTATTTGCAGAGAAAAGTGAAGAAGAAGCCTCTTCGAATCGAACTCATCAAACAGATTGATATCTACAGATACCATCCTTGGGATCTTCCAACGAGTAATGGTGGGGTGGAGGGGGAGAGAGAAGGGTATTTTTTTTGCAGAAGAAGGAGAAAGTACAGGAACAGCAAGAGGCCTAACAGGGTGACAGTGAGTGGGTCTGGTTTCTGGAAAGCTACAGGCATTGATAAGCCTATATATGGAGAAGGAGATCAAAACGGCGTCGTAATAGGCCTGAAGAAGTCATTAGTGTATTATCAAGGAAGTGCTGGTAAAGCCTCCAAAACTGATTGGATGATGCATGAGTTTCGTCTTTCTCCTCCTCCTCCCAACAACACTTCTTCTACTGATCCTCTTCTTCATGATGCTGAAGTTTGGACACTCTGCAAAATATTCAAACGAACCCCATCTCAAAAGAAGTACACACAAGCAGCAGCAATAAAACCCAGCATAGCTCACTCAACTACTGAACCAGGAAACTTAAGATCTGACATCAATGGCAACTCATTCTTCACTTTCAAAAACCCGATGATCATTCAGCAAAATGATGAAAGGAAGCAGATAAGGAAGAACAATGAAGAGGTTGAACATGAAAGAAATCACTTATTTCTGGATCAGTTGCCTCAAGCTTCACCATCAATAGTATCTTACCCTTGCTTTTGGGACCCTGGTGAGATGATGGAAGAGAATATATTTGCTGATGGAAACTGGGATGAGCTTCAACCTATGGTTCAATACTTCAATTAG 897 0.4181 MEVMGKLKVRLSSSEEEEGEVMAPGFRFYPTDEELVGFYLQRKVKKKPLRIELIKQIDIYRYHPWDLPTSNGGVEGEREGYFFCRRRRKYRNSKRPNRVTVSGSGFWKATGIDKPIYGEGDQNGVVIGLKKSLVYYQGSAGKASKTDWMMHEFRLSPPPPNNTSSTDPLLHDAEVWTLCKIFKRTPSQKKYTQAAAIKPSIAHSTTEPGNLRSDINGNSFFTFKNPMIIQQNDERKQIRKNNEEVEHERNHLFLDQLPQASPSIVSYPCFWDPGEMMEENIFADGNWDELQPMVQYFN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0338 298 Gene3D NAC domain 31 188 IPR036093 GO:0003677|GO:0006355
Acco05g0338 298 ProSiteProfiles NAC domain profile. 22 184 IPR003441 GO:0003677|GO:0006355
Acco05g0338 298 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Acco05g0338 298 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 233 - -
Acco05g0338 298 Coils Coil 228 248 - -
Acco05g0338 298 Pfam No apical meristem (NAM) protein 24 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0338 Acco-ChrAcco05 4265527 4268877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0338 10 185 NAC Transcription Factor Family AT1G26870 53.125 4.39e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco05g0338 NAM 1.5e-33 No_clan