Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0310 ATGCCTCTTCTCTCTCTTTTATTTTTGCTTTCTCTTTACTGTTTCTCTCTCTCTGCTTTCCTCCATTACAAACCAAGCTTCCTTTCCAGCTCGCAAGAGGGTTTGTTTGTGTTCCCTGTCGTGTACCTGCGTCTATCTATGCTCATTGAGTCTTTGTCAATTCAAAAGGAAGGAACTCTCTTGCTTCTTTGGGTGTTAAAGGTAGTAGATCAAGGAGGCTGGCCTAGATCAATACAAAGCTGTGAATTAGACTGCTCAGATGTGTTTTTCCAAGCCTTGTGTGAAAGGAATACATTGTTTCTCTACTTGGTTGGGAATACCTTGATTCTTGTTGCCAAAGAACTTGGAGAACGATTAGATCAACTTGTGGCATCCAACATGTCATCCAATGGCTCTTTAAAAGCGGAATTGTCAAAGAAGGTTTTGGGTGTGAAATTATGGATTTTAATTGGGATTTGCGTAGGTGCGTTTATAGTACTTATTCTTTGTATATTATCTATATGGGTGATGTTTCGGAGAAAGTCTAGAAGATCTCTTGACGGATATTCTTCATCCCAAATACCAAATATCTCAAAAGATATTAAGGTGGACAAAGTTGGGGTGCAGAGTTCTTATGATCACCCAGAAAGTGTATTTATTCATGTTAATGACAAATCAACTGATAAGAACTCAGATAAGCTGCTGACCCACTTGGGTATGAGCAAATCCAGTGATCCTGACAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCCCTGTCAGGAGAAGAAGGAAGCTCGGGGACTGCAAAGAAGCATTCCACATTGTCATATGGAGGGCTTGTGACTGCATCTCCTTTAGTTGGCTTGCCAGAAATTTCTCATCTTGGATGGGGTCATTGGTTTACACTAAGGGATCTGGAACTGGCAACAAATCGTTTCTCAGCTGAAAATGTGCTAGGTGAGGGAGGATATGGTATTGTTTACAAGGGCAGGCTGATCAATGGAACTGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAGGCAGAGAAAGAATTCGGGGTAGAAGTGGAAGCCATAGGCCATGTACGACATAAAAATCTTGTACGACTGCTTGGATACTGCATTGAAGGAGTTCAAAGGCTTTTGGTGTATGAATATGTAAATAACGGCAACTTAGAACAATGGTTACATGGGGCTTTGCGCCAACATGGAATTCTTACCTGGGAGGCCCGCATGAAAGTTGTAATTGGCACTGCCAAAGCGCTTGCTTACTTGCATGAAGCAATTGAACCAAAAGTTGTTCACCGTGATATAAAGTCAAGCAACATATTAATTGATGATGAGTTTAATGCCAAGGTTTCTGACTTTGGATTGGCCAAACTTTTGGATTCAGGAGAAAGCCACATAACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTATTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTCTTGGAAGCAGTCACTGGCAGGGACCCTGTAGACTATGCGCGACCTGCTAACGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAAAAGAGCTGATGAAGTTGTTGATCCAAGCCTTGAAGTTAAACCACCAACCCGAGCTTTAAAGCGTTCTCTTCTGGTCGCACTTAGGTGTGTTGATCCTGATGCAGAGAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCCTTCCGAGAGGACCGAAGGAACCGGAAGAGCCGCACTACTAGCATGGAAATTGATTCCATCAAGGATATTTCTGGTTCATCTGAAGCAGAAAAAAAGCCGGGCGAGGCCGAAAACCAAGCACTGGATACAGCTGAGGGGTAG 1908 0.4245 MPLLSLLFLLSLYCFSLSAFLHYKPSFLSSSQEGLFVFPVVYLRLSMLIESLSIQKEGTLLLLWVLKVVDQGGWPRSIQSCELDCSDVFFQALCERNTLFLYLVGNTLILVAKELGERLDQLVASNMSSNGSLKAELSKKVLGVKLWILIGICVGAFIVLILCILSIWVMFRRKSRRSLDGYSSSQIPNISKDIKVDKVGVQSSYDHPESVFIHVNDKSTDKNSDKLLTHLGMSKSSDPDNISQCSSIYHHERGFSSLSGEEGSSGTAKKHSTLSYGGLVTASPLVGLPEISHLGWGHWFTLRDLELATNRFSAENVLGEGGYGIVYKGRLINGTEVAVKKILNNLGQAEKEFGVEVEAIGHVRHKNLVRLLGYCIEGVQRLLVYEYVNNGNLEQWLHGALRQHGILTWEARMKVVIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTKRADEVVDPSLEVKPPTRALKRSLLVALRCVDPDAEKRPKMSQVVRMLEADEYPFREDRRNRKSRTTSMEIDSIKDISGSSEAEKKPGEAENQALDTAEG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0310 635 MobiDBLite consensus disorder prediction 590 605 - -
Acco05g0310 635 Gene3D Phosphorylase Kinase; domain 1 294 387 - -
Acco05g0310 635 CDD STKc_IRAK 318 584 - -
Acco05g0310 635 MobiDBLite consensus disorder prediction 590 635 - -
Acco05g0310 635 Pfam Protein kinase domain 314 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0310 635 Gene3D Transferase(Phosphotransferase) domain 1 388 601 - -
Acco05g0310 635 MobiDBLite consensus disorder prediction 612 627 - -
Acco05g0310 635 Coils Coil 332 352 - -
Acco05g0310 635 SUPERFAMILY Protein kinase-like (PK-like) 296 585 IPR011009 -
Acco05g0310 635 ProSitePatterns Protein kinases ATP-binding region signature. 318 341 IPR017441 GO:0005524
Acco05g0310 635 PANTHER OS01G0323000 PROTEIN 127 606 - -
Acco05g0310 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Acco05g0310 635 FunFam Putative receptor-like serine/threonine-protein kinase 388 598 - -
Acco05g0310 635 SMART serkin_6 312 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0310 635 ProSiteProfiles Protein kinase domain profile. 312 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0310 635 FunFam Putative receptor-like protein kinase 294 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0310 Acco-ChrAcco05 3939062 3943889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0310 143 586 Trihelix Transcription Factor Family AT1G70460 40.444 3.64e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco05g0310 Pkinase 7.6e-47 CL0016