Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0302 ATGGGCAATTCTATTAGAGACATTGGTAATGTGGGCACCTCTAGTTTCAAACCCTCGCGGGCTCACTCTGACGGAGAAAAACCCTTGTGGCCGATGGCTGCGGCGAACCAAGCGCGGCGACCTTATACATCTTCCGAGTGGATTAGCCGTAAAACGGTGGAACAAGCCGTGAGATCGCTCCTGAAGTGGAGAAAATCCAAGTCCCACAGCGAGAAGCTCAAGTCATCGGATCAAGAAGACGAGTTCTTCTACCTCGTTCTCTCCCTCAATAAAATCCCCCACCGTGATCGCGCAAATACTTACAAGATTCTTCTTCCGCATTCTCTTCTCTCCGAATCTTCCGAGCTCTGTTTAATCATCGATGACAGACACAAGAAAGGACTCACTAAGGACGATGCGCAGAAGAAGATCAAATCGGAGAATATCCCTGTTTCGAATGTATTGAAGCTCTCGAAGCTCAAGTCCAATTACCGTTCGTCCGAGACGAAGCGAGAGCTATGTGATTCTTACGAAATGTTTTTCGCGGACAAGAGTGTGATTCCGCTGTTGCAGGGCCTATTGGGGAAGAAGAAGGCTCCTGTGCCGTTGGATTTGAAGGATAGGAATTGGAAAGAGCAGATTGAAAAGGCTTGTTCTTCTACATTGTTGTGTTTGAGGACAGGTACGTGTTATGTGGTGAGAGTGGCCAAAGTATCGATGGAGAAGGATGGGATTGTTGAGAATGTGATTGCTGCTTGTAATGGTATCGCCGAGGTTGTGCCCAGTAAGTGGGGGAATATAAGGTCGCTTCACTTGAAATTGTTGGAGTCTCTTTCATTACCTATTTATCAAACAGTTCCAGATAAGGATTCTGATTAA 858 0.465 MGNSIRDIGNVGTSSFKPSRAHSDGEKPLWPMAAANQARRPYTSSEWISRKTVEQAVRSLLKWRKSKSHSEKLKSSDQEDEFFYLVLSLNKIPHRDRANTYKILLPHSLLSESSELCLIIDDRHKKGLTKDDAQKKIKSENIPVSNVLKLSKLKSNYRSSETKRELCDSYEMFFADKSVIPLLQGLLGKKKAPVPLDLKDRNWKEQIEKACSSTLLCLRTGTCYVVRVAKVSMEKDGIVENVIAACNGIAEVVPSKWGNIRSLHLKLLESLSLPIYQTVPDKDSD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0302 285 SUPERFAMILY Ribosomal protein L1 59 276 IPR023674 -
Acco05g0302 285 CDD Ribosomal_L1 53 275 IPR028364 -
Acco05g0302 285 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 55 270 - -
Acco05g0302 285 Gene3D - 116 213 IPR016095 -
Acco05g0302 285 MobiDBLite consensus disorder prediction 1 41 - -
Acco05g0302 285 FunFam Ribosomal protein L1p/L10e family 126 212 - -
Acco05g0302 285 Pfam Ribosomal protein L1p/L10e family 70 270 IPR028364 -
Acco05g0302 285 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0302 Acco-ChrAcco05 3845923 3847202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0302 93 266 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 24.157 4.78e-06 44.7