Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0298 ATGTCCAACAAAGGAAAGAGGAACACAAGAATTGTTGTTGCCATAGTTGTGCCAACTGTTGCCGTCATTGCATTAGTCATCTTTGTCATTATAATTAAAGCCAGGACGCTAAAGAAGACTATCCAAACTGTAGAAGATCAAGATGAAATCATGACCGTTGAGTCATTGCAAATGGACTTTGAAACCATCAAAGTGGCAACAAATGATTTTTCTGATGCGAATAAGCTTGGACAAGGTGGATTTGGACCTGTTTACTTGGGTAGGTTAGGTGATGGAGAAGAGATTGCAGTAAAAAGCCTTGATTGCTTCATTTTTGATTCCGTCAAAAGAGTGAAATTGAATTGGGAAAAGCGTTACAAAATCATAGAAGGCATTGCTAGAGGTCTTGTATACCTTCATCATGATTCTCGAGTAAGAATCGTTCACCGTGATCTCAAAGCAAGCAATGTGCTTTTAGATGGAGAGATGAATGCTAAGATATCAGATTTTGGCATGGCAAGATTATTTATGGTAGATCAAACTCAAGCCAAAACAAGTACAGTGGTTGGAACTTATGGATACATGGCACCCGAATATGTAATAAATGGAACATTTTCAACCAAATCAGATGTATTCAGTTTTGGAATATTGGTTTTGGAAATTATAAGTGGCCAGAAGAACGGTCAATTCCAGGATGGGGAAAATGCAGAGCATATAGTAAGCGCGGTTTGGAAAAACTGGACAAAAGGAACGGTGTCAAATATTGTGGATCCAGCGTTGATGGAGCAGGATGCTGGGTCAAGAAATGAAATACTTAGATGCATCCACATAGGGTTACTGTGTGTTCAAGAAAATGCAGATCACAGGCCAACAATGGCTTCCATTGTTCCAATGCTAAGTACTCATTCCATAACCCTACCTGTCCCTTCAGAACCTTCGTTTTATATTTGGAGAAGCTTACCAGGAATCAAATCAATCTCTTCTGGAGATCAATCTGCCGATGGATCCATAAATCATCTTTCAATTTCGGAGCAATATCCTCGCTAG 1026 0.3938 MSNKGKRNTRIVVAIVVPTVAVIALVIFVIIIKARTLKKTIQTVEDQDEIMTVESLQMDFETIKVATNDFSDANKLGQGGFGPVYLGRLGDGEEIAVKSLDCFIFDSVKRVKLNWEKRYKIIEGIARGLVYLHHDSRVRIVHRDLKASNVLLDGEMNAKISDFGMARLFMVDQTQAKTSTVVGTYGYMAPEYVINGTFSTKSDVFSFGILVLEIISGQKNGQFQDGENAEHIVSAVWKNWTKGTVSNIVDPALMEQDAGSRNEILRCIHIGLLCVQENADHRPTMASIVPMLSTHSITLPVPSEPSFYIWRSLPGIKSISSGDQSADGSINHLSISEQYPR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0298 341 FunFam Cysteine-rich receptor-like protein kinase 28 95 300 - -
Acco05g0298 341 Pfam Protein tyrosine and serine/threonine kinase 111 291 IPR001245 GO:0004672|GO:0006468
Acco05g0298 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Acco05g0298 341 SMART serkin_6 70 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0298 341 SUPERFAMILY Protein kinase-like (PK-like) 59 319 IPR011009 -
Acco05g0298 341 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 100 - -
Acco05g0298 341 MobiDBLite consensus disorder prediction 320 341 - -
Acco05g0298 341 ProSiteProfiles Protein kinase domain profile. 1 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0298 341 Gene3D Transferase(Phosphotransferase) domain 1 100 299 - -
Acco05g0298 341 Gene3D Transferase(Phosphotransferase) domain 1 43 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0298 Acco-ChrAcco05 3767555 3770131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0298 34 341 Receptor kinase-like Gene Family AT4G23150 45.355 2.77e-105 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g0298 PK_Tyr_Ser-Thr 2e-30 CL0016