Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0280 ATGAAGCTCAATTTTGGATGTCCAGATCTTATGCTTTCTCTTCTCCTCCTTGGCTCCACTTCAATCTTCATCTTCCTCCCCCAGATCGCTCTCGCAGCTACACCCAAGCTCAGCATTAATGAAGTGAAGGCATTGGAGGAGATAGGGAAGAAACTGGGGAAGAAGGAATGGGACTTTGGGGTAGATCCCTGCAGTGGTAAAGGCAAATGGAATGTGACAGATGAGAGGAAAGGCTTTGCCAGCTCTCTCATCTGTGATTGCTCCTTCCATCTCAATTCATCCTGCCATGTTGTAGGCATATTTTTGAAGGCTCAGAATCTTTCTGGTACTCTTCCACCAGAGTTTTCCAAGCTTCGGCACCTCAAGCAATTGGACCTTAGTCGTAACATCTTCACTGGTTCTATACCTCAGCAATGGGCTACTATGCACTTGGATGAGCTCTCTCTTATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCAAAACCCTCAGAAACCTGAGTATTGAAGGGAACCTATTTTTAGGCCCCATTCCTCCAGAGATTGGAAACTTGGTCCATTTAACAAAAATTATTCTGTCATCAAATGCATTCACAGGAGAATTGCCGCCTGCTCTTTCAAAGTTGACCAAGTTGACTGATTTGAGGATTAGTGACAATAATTTCTCTGGGAGGATACCAGATTTCGTTGGCAAATTGACATCAATTGAAAAGCTGCACATTCAGGGTTGCTCCCTTGAGGGACCCATACCTTCCAGCATTTCTCGCTTGAGAAGATTATGTGATTTGAGGATAACTGACCTGAAAGGAAGAGGCTCATCTTTCCCCTCATTTGGTTATATGAAATCAATGAAGACCCTTATACTGAGGAGGTGCTTGATTAAAGGAAAGATCCCCGACTATATTGGGAATATGAACAAACTGAAAATCCTAGACTTGAGTTTCAATGACTTGACTGGAAGGGTACCTGCCACTTTTGACCAACTCGACAAAGTAGACTTCATGTATCTTACTGGGAACAAGTTAACAGGGACTATACCTAGCTGGGTTCTTGGAAGAAATAGAAATATTGATATTTCTGACAATAACTTTAGCTGGGAGAGCTCAAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGGGCTACTCTTCTTCTGCCAATAATCTAAAAAATGTTCACGCATGCTTGAAAAAGAACTTTCCATGCTCTGATCTGGACAGAGAATACTACTCCTTGCACATTAACTGTGGTGGCAAGGAAGAAAATATCAGTGGTACTATTTATGAAGGGGACAGAGAACAAAGAGGTGCTTCAATGTTTTACTATGGCAAGAACTGGGCTCTCAGCAGCACTGGGAACTTCATGGACAATGATATTGAGTCTGATCCCTATATTGTGACCAACACTTCCAAACTTCTCAATGTCTCTGCTCTCAGCTCAGAACTATACACGACAGCTCGTTTGTCTCCCCTTTCTCTCACGTACTATGGACTCTGTCTAATGAATGGAAACTACACCGTTAGTCTCCACTTCGCAGAGATTTTGTTTATCAATGATAGATCATTTTACAGTCTTGGGAGGCGCGTGTTTGATGTCTACATACAGGGAAAGTTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAACCGATTGTGAAGACATTCAACGCCTCGGTCACGCAACATTCCTTGAAGATTCACTTTTATTATGCTGGAAAAGGGACTACTGGCATACCCACAAGAGGAATTTATGGACCTCTGATATCTGCCATATCAGTAGATCCTAATTTTAAACCTCCACCACCAGGGATTGGAAAGAGAACGTTTATTATAGTGGCAGTTGCTATGTCAGCTGCTCTTGTGCTTCTTGTTCTGATGCTCCTAGGAATCATGAGGTGGAAGGGCTGGTTAGGAAGCCAAGACTCTATGTATAAAGACCTTAGAGGAATAGACCTGCAGATAGGATTATTCACATTAAGGCAAATCAAATCAGCAACCAAAGACTTTGATGCTACTAACAAAATTGGAGAAGGCGGCTTTGGTCCTGTTTACAAGGGTCTGCTATCTGATGGCACTGTAATTGCAGTAAAGCAACTCTCCTCAAAATCTAAGCAAGGAAACCGAGAGTTTGTGAATGAGATAGGAATTATTTCTGGACTTCAACATCCAAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAGTTGATTCTGATATATGAGTATATGGAAAATAATTGTCTATCACGTGCACTTTTCGGAAAAGATCCAGCCTTTAAAGCAAAACTAGAATGGACAACCAGGAAAAAAATTTGCATCGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACAAGTAATGTGTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTGATGAAGATGATAATACCCATATCAGCACTCGAGTTGCTGGAACCATTGGTTATATGGCTCCTGAGTATGCAATACGTGGCTATTTGACTGACAAAGCTGATATATATAGCTTTGGGGTGGTTATGTTGGAAACTATCAGTGGAAAGAGCAATACAAATTACAGACCCAATGAAGAATTTGTTTACCTTCTTGATTGGGCCTATGTTCTGCAAGAGAGAGGGAATCTACTAGAACTGGTTGATCCAGACTTAGGATCAGAATATTCAACTGAGGAGGCAATGGTTATGCTAAATGTAGCTCTCTTGTGTACCAATGCATCACCCACACTTAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTTCTTTCAGACCCAGGATACTGTGCAAGTAGTTCCAAACACAAGTCCATCAGAAGTCACTTCTGGCAGAACCCAGATTCTGATTCCTCTCGTTCATACCTTGGGACTGAAGAAAGCTACCGTCTTGTGCATGTTAACCCTGATAGATCAGATAAGTAA 3042 0.4152 MKLNFGCPDLMLSLLLLGSTSIFIFLPQIALAATPKLSINEVKALEEIGKKLGKKEWDFGVDPCSGKGKWNVTDERKGFASSLICDCSFHLNSSCHVVGIFLKAQNLSGTLPPEFSKLRHLKQLDLSRNIFTGSIPQQWATMHLDELSLMGNKLSGPFPKVLTNIKTLRNLSIEGNLFLGPIPPEIGNLVHLTKIILSSNAFTGELPPALSKLTKLTDLRISDNNFSGRIPDFVGKLTSIEKLHIQGCSLEGPIPSSISRLRRLCDLRITDLKGRGSSFPSFGYMKSMKTLILRRCLIKGKIPDYIGNMNKLKILDLSFNDLTGRVPATFDQLDKVDFMYLTGNKLTGTIPSWVLGRNRNIDISDNNFSWESSSPVECPRGSVNLVEGYSSSANNLKNVHACLKKNFPCSDLDREYYSLHINCGGKEENISGTIYEGDREQRGASMFYYGKNWALSSTGNFMDNDIESDPYIVTNTSKLLNVSALSSELYTTARLSPLSLTYYGLCLMNGNYTVSLHFAEILFINDRSFYSLGRRVFDVYIQGKLVLKDFNIEKEAGGTGKPIVKTFNASVTQHSLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFKPPPPGIGKRTFIIVAVAMSAALVLLVLMLLGIMRWKGWLGSQDSMYKDLRGIDLQIGLFTLRQIKSATKDFDATNKIGEGGFGPVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGIISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPAFKAKLEWTTRKKICIGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLDEDDNTHISTRVAGTIGYMAPEYAIRGYLTDKADIYSFGVVMLETISGKSNTNYRPNEEFVYLLDWAYVLQERGNLLELVDPDLGSEYSTEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDFLSDPGYCASSSKHKSIRSHFWQNPDSDSSRSYLGTEESYRLVHVNPDRSDK 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0280 1013 SUPERFAMILY Protein kinase-like (PK-like) 666 955 IPR011009 -
Acco05g0280 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 990 - -
Acco05g0280 1013 SMART serkin_6 681 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0280 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 650 756 - -
Acco05g0280 1013 Pfam Protein tyrosine and serine/threonine kinase 684 952 IPR001245 GO:0004672|GO:0006468
Acco05g0280 1013 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Acco05g0280 1013 CDD STKc_IRAK 687 955 - -
Acco05g0280 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 206 - -
Acco05g0280 1013 Gene3D Ribonuclease Inhibitor 236 380 IPR032675 -
Acco05g0280 1013 Gene3D Ribonuclease Inhibitor 54 165 IPR032675 -
Acco05g0280 1013 Gene3D Ribonuclease Inhibitor 166 235 IPR032675 -
Acco05g0280 1013 Gene3D - 415 607 - -
Acco05g0280 1013 ProSiteProfiles Protein kinase domain profile. 681 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0280 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 757 965 - -
Acco05g0280 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 237 384 - -
Acco05g0280 1013 Gene3D Transferase(Phosphotransferase) domain 1 757 965 - -
Acco05g0280 1013 SUPERFAMILY L domain-like 91 352 - -
Acco05g0280 1013 Gene3D Phosphorylase Kinase; domain 1 651 756 - -
Acco05g0280 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Acco05g0280 1013 Pfam Malectin domain 418 603 IPR021720 -
Acco05g0280 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 416 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0280 Acco-ChrAcco05 3446903 3459772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0280 40 991 Receptor kinase-like Gene Family AT1G53440 53.264 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco05g0280 PK_Tyr_Ser-Thr 7.7e-47 CL0016