Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0273 ATGCTTATGCTTATTATCTATGCGTGATTGACAATGGGGAAGAACGAGTTTCTCACACCAAAGGCAATAGCTAATCGAATCAAAGCAAAGGGGCTGCAAAAGCTTAGGTGGTACTGCCAGATGTGTCAGAAACAATGTCGAGATGAGAATGGGTTCAAGTGTCATTGTATGAGTGAAAGTCACCAGCGTCAAATGCAAATCTTTGGACAAAACTCAAATCGGATAGTTGAGGGGTATTCTGAAGAGTTTGAGAACACCTTTCTTGAGCACATGAAGCGCAGCCACCGTTTCAGTCGTATAGCAGCTACAGTAGTTTACAACGAATACATTAGCGATAGACATCACATTCATATGAATTCCACGAAATGGCTTACACTAACTGAGTTTGTCAAATATTTGGGTCGGACTGGAAAGTGTAAGGTTGAAGAAACACCCAAGGGTTGGTTTATCACCTACATCGATAGAGACTCTGAGACTCTTTTCAAAGAGAGGATGAAGAATAAGAGAATAAAGTCCGACATGGCAGAAGAAGAGAAGCAAGAGAAGGAGATACAAAAACAGATAGAAAAGGCCGAGCAGTTGATGCAGCCATCTGTCTCTGGATCTGATCAACCTTCACAGGCTGAACTTCCAAGAGATTTAAAAGTGGAAGATGGAGTCAAGATTGGGTTTTCTCTTGGTTCATCTGCAAAACCTGTAACCAAGGAGAAAAGGGAGGGACCGAAGGTATTATTCGATGAGGTTGAGGATGCCAAAAAGGAAGAAAGGAAACCTGGAGGCTCTTTGAAGAGGAAAGAAAGTGGCAGTGGAAAATCAACCTTAGACGAATTGATGAGAGAAGATGAGAGAAAAAGGGAGAAGATAAATAGAAAGGATTACTGGTTGCACGAGGGAATTGTTGTTAAGGTCATGAGCAAAGCTTTGGCTGATAAAGGGTATTACAAGCAAAAAGGTGTTGTGAGAAGGGTGATTGATAAATATGTTGGGGAAATAGAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGCGGAGCTTGAAACTGTGATCCCCCAAGTTGGTGGTCTTGTTAAGATTGTAAATGGAGCTTATCGCGGATCTACAGCAAGATTGTTAGGAGTTGATACTGATCACTTTTGTGCCAAAGTGCAGATTGAGAAAGGTCCCTACGATGGAAGAGTCCTCAAGGCAGTGGAATACGAGGATCTTTGCAAATTGGCTCAGTGA 1230 0.4211 MLMLIIYAXLTMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNSNRIVEGYSEEFENTFLEHMKRSHRFSRIAATVVYNEYISDRHHIHMNSTKWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKSDMAEEEKQEKEIQKQIEKAEQLMQPSVSGSDQPSQAELPRDLKVEDGVKIGFSLGSSAKPVTKEKREGPKVLFDEVEDAKKEERKPGGSLKRKESGSGKSTLDELMREDERKREKINRKDYWLHEGIVVKVMSKALADKGYYKQKGVVRRVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGLVKIVNGAYRGSTARLLGVDTDHFCAKVQIEKGPYDGRVLKAVEYEDLCKLAQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0273 409 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 12 408 IPR037321 -
Acco05g0273 409 Gene3D - 298 351 - -
Acco05g0273 409 Gene3D - 71 171 IPR038254 -
Acco05g0273 409 SMART Kin17_mid_2 63 189 IPR019447 -
Acco05g0273 409 Coils Coil 165 194 - -
Acco05g0273 409 MobiDBLite consensus disorder prediction 172 214 - -
Acco05g0273 409 FunFam DNA/RNA-binding protein KIN17, putative 352 408 - -
Acco05g0273 409 CDD KOW_KIN17 354 407 IPR041995 -
Acco05g0273 409 Coils Coil 271 291 - -
Acco05g0273 409 FunFam DNA/RNA-binding protein kin17-like 298 351 - -
Acco05g0273 409 Pfam Domain of Kin17 curved DNA-binding protein 63 188 IPR019447 -
Acco05g0273 409 SUPERFAMILY beta-beta-alpha zinc fingers 37 70 IPR036236 -
Acco05g0273 409 MobiDBLite consensus disorder prediction 232 280 - -
Acco05g0273 409 Gene3D - 352 408 IPR014722 -
Acco05g0273 409 Pfam KN17 SH3-like C-terminal domain 290 343 IPR041330 -
Acco05g0273 409 MobiDBLite consensus disorder prediction 172 189 - -
Acco05g0273 409 MobiDBLite consensus disorder prediction 191 207 - -
Acco05g0273 409 FunFam DNA/RNA-binding protein KIN17, putative 72 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0273 Acco-ChrAcco05 3373628 3375433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0273 12 408 C2H2 Transcription Factor Family AT1G55460 71.602 0.0 594