Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0272 ATGGGGAAGAACGAGTTTCTCACACCAAAGGCAATAGCTAATCGAATCAAAGCAAAGGGCCTGCAAAAGCTTAGGTGGTACTGCCAGATGTGTCAGAAACAATGTCGAGATGAGAATGGGTTCAAGTGTCATTGTATGAGTGAAAGTCACCAGCGTCAAATGCAAATCTTTGGACAAAACTCAAATCGGATAGTTGAGGGGTATTCTGAAGAGTTTGAGAACACCTTTCTTGAGCACATGAAGCGCAGCCACCGTTTCAGTCGTATAGCAGCTACAGTAGTTTACAACGAATACATTAGCGATAGACATCACATTCATATGAATTCCACGAAATGGCTTACACTAACTGAGTTTGTCAAATATTTGGGTCGGACTGGAAAGTGTAAGGTTGAAGAAACACCCAAGGGTTGGTTTATCACCTACATCGATAGAGACTCTGAGACTCTTTTCAAAGAGAGGATGAAGAATAAGAGAATAAAGTCCGACATGGCAGAAGAAGAGAAGCAAGAGAAGGAGATACAAAAACAGATAGAAAAGGCCGAGCAGTTGATGCAGCCATCTGTCTCTGGATCTGATCAACCTTCACAGGCTGAACTTCCAAGAGATTTAAAAGTAGAAGATGGAGTCAAGATTGGGTTTTCTCTTGGTTCATCTGCAAAACCTGTAACCAAGGAGAAAAGGGAGGGACCGAAGGTATTGTTCGATGAGGTTGAGGATGCCAAAAAGGAAGAAAGGAAACCTGGAGGCTCTTTGAAGAGGAAAGAAAGTGGCAGTGGAAAATCAACCTTAGACGAATTGATGAGAGAAGATGAGAGAAAAAGGGAGAAGATAAATAGAAAGGATTACTGGTTGCACGAGGGAATTGTTGTTAAGGTCATGAGCAAAGCTTTGGCTGATAAAGGGTATTACAAGCAAAAAGGTGTTGTGAGAAGGGTGATTGATAAATATGTTGGGGAAATAGAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGCGGAGCTTGAAACTGTGATCCCCCAAGTTGGTGGTCTTGTTAAGATTGTAAATGGAGCTTATCGCGGATCTACAGCAAGATTGTTAGGGGTTGATACTGATCACTTTTGTGCCAAAGTGCAGATTGAGAAAGGTCCCTACGATGGAAGAGTCCTCAAGGCAGTGGAATACGAGGATCTTTGCAAATTGGCTCAGTGA 1197 0.4244 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNSNRIVEGYSEEFENTFLEHMKRSHRFSRIAATVVYNEYISDRHHIHMNSTKWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKSDMAEEEKQEKEIQKQIEKAEQLMQPSVSGSDQPSQAELPRDLKVEDGVKIGFSLGSSAKPVTKEKREGPKVLFDEVEDAKKEERKPGGSLKRKESGSGKSTLDELMREDERKREKINRKDYWLHEGIVVKVMSKALADKGYYKQKGVVRRVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGLVKIVNGAYRGSTARLLGVDTDHFCAKVQIEKGPYDGRVLKAVEYEDLCKLAQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0272 398 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Acco05g0272 398 MobiDBLite consensus disorder prediction 221 271 - -
Acco05g0272 398 CDD KOW_KIN17 343 396 IPR041995 -
Acco05g0272 398 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 397 IPR037321 -
Acco05g0272 398 Gene3D - 341 397 IPR014722 -
Acco05g0272 398 SMART Kin17_mid_2 52 178 IPR019447 -
Acco05g0272 398 Gene3D - 287 340 - -
Acco05g0272 398 Pfam KN17 SH3-like C-terminal domain 279 332 IPR041330 -
Acco05g0272 398 Gene3D - 60 160 IPR038254 -
Acco05g0272 398 Coils Coil 154 183 - -
Acco05g0272 398 Coils Coil 260 280 - -
Acco05g0272 398 MobiDBLite consensus disorder prediction 220 271 - -
Acco05g0272 398 FunFam DNA/RNA-binding protein KIN17, putative 341 397 - -
Acco05g0272 398 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Acco05g0272 398 SUPERFAMILY beta-beta-alpha zinc fingers 26 59 IPR036236 -
Acco05g0272 398 FunFam DNA/RNA-binding protein kin17-like 287 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0272 Acco-ChrAcco05 3368609 3369805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0272 1 397 C2H2 Transcription Factor Family AT1G55460 71.602 0.0 594