Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0260 ATGGACATGGTGCCCAGTGCCTCCTTGCATAAAGTAGGCTTTCTTTACCACCACCCCAAAGCAAACAAAGACACAGTGATCCAACACCTGAAAACCTCTCTTTCTTTCACCCTAGATTTCTTCCCACAACTTGCCGGTCGTCTCGCCGTCATTGAACACGACGACGACGACGGAACATCCTCCGTTTTCATTCACTGCAACAACACCGGAGCACTATTTGTCCATGCCCTAGCAGAAAACTTGACCATCTCAGACATCCTTCTACCCGTATACCTTCCTCCCCTTGTCGGGTCCTTTTTTCCGCTCGCCGAGGCTAAAAATTACCAAGGCACTCATAAGCCACTGCTTGCCGTGCAAGTGACGGAACTCGTAGATGGCTTTTTCATAGGCTTCACCGTCAACCACGCCCTCGCCGACGGCAAGTCGCTTTTTCATTTCGTTACTTGCTGGTCTGAAATCGCACGCGGTGGCGGTCTGTTGTCCAAGCCTCCGACGCTCGAACGTTGGTTTCTCAATAGTATTGAGCGCCCTATGCGCATTCGTTTTCCGAAGGACAGTGATCATGAGAAGGAGAAGCTCAACTCACCACTTTTGCCAGAGAGGGTGTTTCATTTCTCAAAGGCCAAAATGACGGAACTAAAAGCAAAAGCTATCACAACGGTAGGTTCGAATCACAATGTATCTTCTCTACAAGTACTTATGGCACATCTTTGGAGGGCTATAATTCGGAACCAAGGTATTGACCCCAAAGAAGAGGTCAACTTCAAGTTGGTGGTAGATATTAGTCCGAGGATAAATCCGCCGTTGGGTCATAACTATTTTGGAAATGCACAGGACGATGGTACCGTGAGCATGACCGCAAGGGAACTATTACGGCAAGAGGGGCTTGGTAAGGCTGCTCTGGAGATGAACAAGGTGGTTGCATTGTATACAGAAGAGACTATCGTGAGCCACTTCAAGTCTTGGTCGGATGACCGTAGGATACTTACGCTCAGTGAGATGTTTCGGGATGCTGTGCATATGGGTGGTTCGCCAACGTTTAATTGTCAGATTTGGAATGATCCTGTTGCTGCACCTATGGAGTTAGGTGGCTCAACTGAGAATTTTGCCAAGAATGCATTTTGGTCTCAACCAATACAGAGTTTCAAAAGGGTGTCAGATTCAGTAATATCTGTCCGGTTTAATCCTGGAGAACCAGATCTCTTGGCAACATCAGCTAGTGACCGGAGCATAACACTATTTGATTTGCGTCAGTCTTCCCCTGCCAGGAAAATCATAATGATGACGAAAACTAATTCTTTATCCTGGAACCCAAGGGAGTCATTAAACTTCACTGCTGTTCTCCCAAGGGAACGAAAGAAGCATGCTTATCATGAAGCCCTAATTAAAGAATCGCTACAAGTACCTCCCTGGAGTGAAACGTATTGTGAGGTAAGATATGATCGAATCAGACAACCATTCAAGTGA 1467 0.4669 MDMVPSASLHKVGFLYHHPKANKDTVIQHLKTSLSFTLDFFPQLAGRLAVIEHDDDDGTSSVFIHCNNTGALFVHALAENLTISDILLPVYLPPLVGSFFPLAEAKNYQGTHKPLLAVQVTELVDGFFIGFTVNHALADGKSLFHFVTCWSEIARGGGLLSKPPTLERWFLNSIERPMRIRFPKDSDHEKEKLNSPLLPERVFHFSKAKMTELKAKAITTVGSNHNVSSLQVLMAHLWRAIIRNQGIDPKEEVNFKLVVDISPRINPPLGHNYFGNAQDDGTVSMTARELLRQEGLGKAALEMNKVVALYTEETIVSHFKSWSDDRRILTLSEMFRDAVHMGGSPTFNCQIWNDPVAAPMELGGSTENFAKNAFWSQPIQSFKRVSDSVISVRFNPGEPDLLATSASDRSITLFDLRQSSPARKIIMMTKTNSLSWNPRESLNFTAVLPRERKKHAYHEALIKESLQVPPWSETYCEVRYDRIRQPFK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0260 488 Pfam Transferase family 7 344 - -
Acco05g0260 488 Gene3D - 374 458 IPR015943 GO:0005515
Acco05g0260 488 Gene3D - 1 184 IPR023213 -
Acco05g0260 488 Gene3D - 185 355 IPR023213 -
Acco05g0260 488 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 12 350 - -
Acco05g0260 488 SUPERFAMILY WD40 repeat-like 349 442 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0260 Acco-ChrAcco05 3114781 3121154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0260 28 293 Monolignol Biosynthesis Gene Families AT5G48930 29.930 5.21e-22 96.7