Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0238 ATGGCTTCTTCCTCTTCCTTTCATTCTTCAAAGAAATACGATGTCTTCATCAGCTTCAGAGGCGAAGACACAAGCGAAAGTTTCACCAGGCATCTTCACGACGCTCTCTGTAGAAGCAAAATCGACACCTACGTTGATTACAGACTGGAGAAAGGAAGCGAGGTTTGGCCATCACTCGTCAAAGCCATTGATGATTCGATCCTGTTTCTGGTCGTTTTTTCTGAGAACTACGCTTCTTCCACTTGTTGCTTGAACGAGATCACGAAAATTATACTCGATTGCTCTAAGGATCAGGGGAATCGTGTTCTACCAGTTTTCTACAGGGTAAACCCTTCACATGTACGGAAACAACAAGGTAGTTACGGACAAGCATTTATGAAACACGAGCAAGGGAATCACAATGAGCAAGTGCAAAAATGGAGGAGTGCTCTCACTCAAGCTGCTAATTTATCTGGCTGGGATTCTGGTAGCTTTAGGAATGAAGCTGCGCTGATTGTAGAAATTGTCAAATGTATTTTAAAGGAGTTGGAGCGTATTCACCGAGTTGATTATTTTGTTGGTCTTGTTGGAATTCATGAACGAATTCTGCCGTTAGAATCGTTCTTGAGCAAGCAGTCAAAAGACGGAACTGAGTCCATCAAAGGCATAGCTTTGGATATGTCAAAAATTGAGGACCTGTCCTTAAGTCCTGAAGTCTTTGCCAGAATGCGCAAGCTTAAGTTTCTTATATTTTATAGTTTTGATTCAGAAGAGATCAGATTGTATCTTCCTCAAGAGCTTAAATCTTTACCAAATGAACTCAGACTCCTTCAATGGGATAACTTCCCTTCAAAGTCCTTACCATATACATTCTCCGCGGAGAAACTTGTTTCGTTTGAAATGCGAAACAGCCAAGTCAGGATGCTTTGGCATGGAAAGCAAAATCTTGTGAACTTGAGGATAATTGACTTCACCGAGTCCTATAATCTAATTGAGCTCCCAGATTTTTCAAAGGCCTTCAATCTTCAAGAAGTATATCTTGGCCACTGTACAAGCTTGCGTGAACTTCATCCATCTATTTTATCGCTCCATAAGCTTGAGATTCTACGATTGGATTGGTGTGAGGCCCTAACTTGCCTTAGATGTGACATCCCCCTAAGGTCCCTTCGTGAGCTTTCCCTCTATGACTGCTCAGGATTGATGGTATTTTCAGTCACCTCAGAGAATTTGAGGCATTTGAATCTAGCGGGGACTGCAGTGAATGAATTGCCATTATCTATTACAAGTGAAGGAAAACTTGAAACGTTCTCTCTTGTCGAAGGTAGAAGACTTGATACTCGAAGCAACTCAGGTGATCTGATGTCTCTAGGCAAGTTGCATACCGGAGATAATTACATGCACCTTGATGTATCGAATCTGCGTTTCTTAAATGATGGCTTAAGATCTTTGGAAGCCTTGCCTCATGAGACTAGCATGTTTTCTTCATTAGAAGTCTTATTAATTGTTGGAACCGAACTTAGAAGCCTGCCTGCAAGCATCAAGCACCTTTTGAGGCTTCGATATCTTCGCTTTGATTCTTCCAAAAGACTTCAATCTCTGCCAGATCTTCCTTCATCATTAGAAAAATTAATAGCCATTGACTGCCCATCACTTGAGACTCTTCACTTCTCTTCAACAACTAGTCAGCTAGTGAAGGAAAACAAGATACGCTTTGACTTCCAAAACTGTGCCAAGTTGGATGAACATTCATTCAAACTTATTGGACCGCATGTTATGGCTGAGATAATCAAATCTGTTCCAGCCATAGAAAAATGCTGTTTCTCGAACGGTAAGGTTGAAGTTATATATCTAGGAAGCAGAGTTCCAGAGTGGTTCCCACATAGGACAACACAAGCTCGCATTACTATTGATCTCTCTTCTGCTTTGCGTTCTTCTGAGAATTGGGGTTTCATCTATTGCGTCATTGTTCCCGAGTCCCCATCAATTGAATGGATTCGAGTTCAATGCGAAGCCCGCTTTGAAATTTGTTATGGTAAATATGATTTGACCCACGAGTACTATTCACTATCCGCCAGGCATGACCTCTTCACATCAGATCATGTTTTTATTTGCTATGATGAAAGCTTTTGTTCTGAAATACGTGAGAAACTCAAAAAAAATGTGGCGGATGATCAGGGCAACACTCGTAAGCCAGGGGTTTCGTTTAATTTCTGGGTTGATTATGGTAGTGGGGAGTTTCATAACAGGCAAACGGGAAGCTTGGATATCAAAGAGTGTGGGTTGTGCCCAACTTATGCATCAGAATATCGCAGTTTCATTAAAAAAATGGACTTGCAATTAAAGTCAAAAACTGCAATTGAAATGGGACATGGAAGCTCTTCTAAGAACGAACAGAGACCTGAGGGATTTGTCTTTCCACCTCCTCCACGTGGAACCTGCAAGCATGAAATAAAGGGGTTGGGAGACATCCTCTTCCTGTGA 2460 0.415 MASSSSFHSSKKYDVFISFRGEDTSESFTRHLHDALCRSKIDTYVDYRLEKGSEVWPSLVKAIDDSILFLVVFSENYASSTCCLNEITKIILDCSKDQGNRVLPVFYRVNPSHVRKQQGSYGQAFMKHEQGNHNEQVQKWRSALTQAANLSGWDSGSFRNEAALIVEIVKCILKELERIHRVDYFVGLVGIHERILPLESFLSKQSKDGTESIKGIALDMSKIEDLSLSPEVFARMRKLKFLIFYSFDSEEIRLYLPQELKSLPNELRLLQWDNFPSKSLPYTFSAEKLVSFEMRNSQVRMLWHGKQNLVNLRIIDFTESYNLIELPDFSKAFNLQEVYLGHCTSLRELHPSILSLHKLEILRLDWCEALTCLRCDIPLRSLRELSLYDCSGLMVFSVTSENLRHLNLAGTAVNELPLSITSEGKLETFSLVEGRRLDTRSNSGDLMSLGKLHTGDNYMHLDVSNLRFLNDGLRSLEALPHETSMFSSLEVLLIVGTELRSLPASIKHLLRLRYLRFDSSKRLQSLPDLPSSLEKLIAIDCPSLETLHFSSTTSQLVKENKIRFDFQNCAKLDEHSFKLIGPHVMAEIIKSVPAIEKCCFSNGKVEVIYLGSRVPEWFPHRTTQARITIDLSSALRSSENWGFIYCVIVPESPSIEWIRVQCEARFEICYGKYDLTHEYYSLSARHDLFTSDHVFICYDESFCSEIREKLKKNVADDQGNTRKPGVSFNFWVDYGSGEFHNRQTGSLDIKECGLCPTYASEYRSFIKKMDLQLKSKTAIEMGHGSSSKNEQRPEGFVFPPPPRGTCKHEIKGLGDILFL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0238 819 Gene3D Ribonuclease Inhibitor 435 620 IPR032675 -
Acco05g0238 819 Gene3D - 9 182 IPR035897 -
Acco05g0238 819 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 208 559 IPR044974 GO:0006952
Acco05g0238 819 MobiDBLite consensus disorder prediction 781 801 - -
Acco05g0238 819 SMART till_3 12 150 IPR000157 GO:0007165
Acco05g0238 819 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 178 - -
Acco05g0238 819 SUPERFAMILY L domain-like 217 546 - -
Acco05g0238 819 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Acco05g0238 819 Pfam C-JID domain 611 761 IPR045344 -
Acco05g0238 819 Gene3D Ribonuclease Inhibitor 198 400 IPR032675 -
Acco05g0238 819 Pfam TIR domain 12 178 IPR000157 GO:0007165
Acco05g0238 819 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0238 Acco-ChrAcco05 2952753 2956640 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0238 209 522 WRKY Transcription Factor Family AT4G12020 34.365 9.51e-33 135