Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0233 ATGCCATGTAAAGTTTCTACTCCTGACTTCTCGTCTTCCCGCCATTGCGAACTTTTTTCTGTTGCCAGCAAAGTGTCCCTCAAATCAAGATTGCCTTTCATTCTTTCTTTCTTCCACTCCACTACTCAGGTTATCGCCTATCGTATTTGTGGAATGTTGCCTGACCAAGAAATCAATATCTCTCTCGTTAGCGTGATAGATGAAAACCTAACGCAGCTGAAGATGGTCAATGCTGTTGTTTTCTCTGTTCTTTACAGTGACAAATACTATGCCAATGTCCTTGCTTCTGGCCAACTCTCAAAACTAGGTTTCCTGTTGCTTTGTTTTGAAACTGTTGATTTTGGTCCTTCGGCTGTTGGCTACATTTCTTATTACAGAGATACTTGTGTTGGGGCAATTGCATGCCAGCGTGTGAAGAAGGAAGATGGCACAATTAGGGTCTACATCACAACTTCAGGTGTTTTAGCACCTTATCGCCGCCGTGGTATTGGAACAAGGCTGATGATCCATGTTCTTGATTTGTCCTCCAAGGAGAAAATGTCTGAGGTTTATTTGCATGTGCTGACAGACAATGAAGATGCCATGAAGTTTTATAAGAAATTTGGTTTTGAAATGATGGAAAGAGTCCCAAATTATTTTAGGAATGCTATTATTTTAAGAGGATGCTATGGTCTCACCAAGCGTTTGGTTGTTCTCACCGAGCAGAAGGTAGTTGATGGGGAGATATTATCATCTCAACTCCTTAACCCTTTACCACATTCTAAATCTACACCCACCAAACTCTCTCTCTCTTTCTCTCTCTCTCTGACTCTTGTAATAATGGCGACACAAGCTTTGGTTTCTTCATCGTCTCTCACCTCGTCGGTGAAGGCTGCGAGGCAGATTCTGGGAGGGAGATCAACTCAGTATCCAACTGTATCTTCTAGAAAGGCTTCTTTTGTAGTCAAGGCTTCTTCTTCGCCTCCTGTTAAGCAAGGAGCAGATAGACCCTTGTGGTTTGCATCCAAACAGAGTCTTTCCTACTTGGATGGCAGTCTTCCAGGTGACTATGGATTTGACCCACTAGGACTCTCAGACCCAGAGGGACCAGGAGGGTTCATTGAACCCAGATGGCTAGCATATGGTGAAATCATCAATGGACGTTATGCAATGTTGGGTGCAGTAGGAGCCATAGCACCTGAAATCCTAGGCAAGGCTGGTCTAATCCCTCAAGAAACAGCACTTCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTATTGGGCTGACCCATACACCCTCTTTGTCTTAGAAATGGCTCTAATGGGTTTTGCTGAGCACAGGAGATTCCAAGATTGGGCCAAGCCTGGGTCCATGGGGAAGCAGTACTTCTTGGGCCTAGAGAAGGGCTTGGGTGGGTCCGGTGACCCGGCTTACCCGGGAGGCCCATTCTTTAACCCTCTAGGGTTTGGGAAGGACGAAAAGTCAATGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCTATCTTGGGATACTTTATACAAGGTCTTGTCACTGGTGTTGGACCTTACCAGAACCTTCTGGATCATTTGGCTGATCCTGTGCACAACAATGTCTTGACCAGCCTTAAGTTCCACTAA 1650 0.4509 MPCKVSTPDFSSSRHCELFSVASKVSLKSRLPFILSFFHSTTQVIAYRICGMLPDQEINISLVSVIDENLTQLKMVNAVVFSVLYSDKYYANVLASGQLSKLGFLLLCFETVDFGPSAVGYISYYRDTCVGAIACQRVKKEDGTIRVYITTSGVLAPYRRRGIGTRLMIHVLDLSSKEKMSEVYLHVLTDNEDAMKFYKKFGFEMMERVPNYFRNAIILRGCYGLTKRLVVLTEQKVVDGEILSSQLLNPLPHSKSTPTKLSLSFSLSLTLVIMATQALVSSSSLTSSVKAARQILGGRSTQYPTVSSRKASFVVKASSSPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGPGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0233 549 CDD NAT_SF 121 186 - -
Acco05g0233 549 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 281 544 IPR001344 GO:0009765|GO:0016020
Acco05g0233 549 Gene3D Chlorophyll a/b binding protein domain 331 548 - -
Acco05g0233 549 Gene3D - 56 227 - -
Acco05g0233 549 Pfam Acetyltransferase (GNAT) family 116 203 IPR000182 GO:0016747
Acco05g0233 549 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 115 217 IPR016181 -
Acco05g0233 549 SUPERFAMILY Chlorophyll a-b binding protein 328 545 - -
Acco05g0233 549 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 58 230 IPR000182 GO:0016747
Acco05g0233 549 FunFam Chlorophyll a-b binding protein, chloroplastic 330 548 - -
Acco05g0233 549 Pfam Chlorophyll A-B binding protein 340 518 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0233 Acco-ChrAcco05 2921162 2926874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0233 274 549 Chloroplast and Mitochondria Gene Families AT1G61520 86.232 2.30e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Acco05g0233 Chloroa_b-bind 2e-46 No_clan