Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0229 ATGAGAACTAAATCTCCTGGTGGAGGTAGGGCTAAAACTTCTACGAAACCTTCCCACCCTACCGCAAGGGCAATTCCTCGGGATGAAGATGATGCAGCTGTGCCTAAAACATCCAATGAAAGTAATCGTGATCTGCTAGATGGTAGAGAGGTGGGTTCAAAAGACAACGTGGATAATGTAATTGATGAGGGCTCTAATAAAATCCTTCATGAGAGTTTAGGTCATGACAACATTTGTATAGATGTTGTGGATAGAAAAATTTGCATCCGTTGCAATGGAGGTGGAGAAGTATTAGTTTGCAGTGAGAATGGTTGTCCTGTTGTTGTCCATGCAAAATGTATCAGCTGCAAACCTAAATTTGATGATATGGGAGAGTACTACTGCCCTTATTGCTGGTTAAAAAGAACACTGGCAGAGGTCCAAGTATTGAGGAATAAGGCTTTAACAGCAAAGAAAGATTTGTCAGACTTTTTAGATAACAATGCAAATATGAGTGATAAATTGGCCCAAAAATATGGGGAAGAAAAAAGAAAAGATTCCAATGAGTTATCCCTTGCAGCAAATGGGAGCTGCATTGATTACAGGAGTAGGAAGGGAAATGGCAGCGCATGCACACAGCCCTCACAGAGAGTGGAAGATCAACAAAATGAGATGGAAGGAGTGACAGCTAATGCTGATCGACACGAAGTAGCAATAGAAAATGACACTAATGCAAATGCTCAAGTAAATACACCAGAGCATATGGATCATGGGGGAGAAAATACACCAGAGCATATGGATCTGATTGATAAATCTATGACCAGGGAGAAAGATGATGTTCATAAAATTTCAGAAGCACATAAAACCACATTTGTTGAAGGAAAAGAGGAGATTGAACCAGAGCATCCAAGATATAGTGATAAAAACATTCATGAAGGGGTTTCTGAGGATGAAGAGGAAGCATCTCCTTCAAGCTCATGCCATATGGGAAAACACAAAGATGGACTCTCACCTGATGTTGCATTTGTCAAACGGGCACAAGAAAATATTGCAGAAGATAATGAGGACACAAGGCAAGACAGAGAGAAGTTGCTCCAGAATGAATCAAAATCAGTGGATACCTCTGTCAGTGAAACTAATGATTCAGGTTCTGAAGCTCTCTTAGTGAAGAAACGACGTATCAAACATACGGCACAAAGGCATCCTCGGAGAGCTAAGAACACCAAGGTTGAAAATGGTTGTCATGAAGATGAGGAAGTTACCAGTGCTGGAACTTTGAGACACGCCCAGAAATCTTTTAAGCAAGGTCACAGCAAAAAACTGACTCTACCAACTAGAAAACGGAGGAGATTACACTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTTAAAATTCTCAAAGGAAAACCGAAATATCCCTTGGAGGAAAATTTTAGAATATGGTGGTGATGTATTTGATGATACACGCACCCCAGCTGATCTTAAGGATAAATGGAGGACCACGGCAGCAGGGGCAGGATCATATCATCTTCAGTACAAGTAG 1530 0.4072 MRTKSPGGGRAKTSTKPSHPTARAIPRDEDDAAVPKTSNESNRDLLDGREVGSKDNVDNVIDEGSNKILHESLGHDNICIDVVDRKICIRCNGGGEVLVCSENGCPVVVHAKCISCKPKFDDMGEYYCPYCWLKRTLAEVQVLRNKALTAKKDLSDFLDNNANMSDKLAQKYGEEKRKDSNELSLAANGSCIDYRSRKGNGSACTQPSQRVEDQQNEMEGVTANADRHEVAIENDTNANAQVNTPEHMDHGGENTPEHMDLIDKSMTREKDDVHKISEAHKTTFVEGKEEIEPEHPRYSDKNIHEGVSEDEEEASPSSSCHMGKHKDGLSPDVAFVKRAQENIAEDNEDTRQDREKLLQNESKSVDTSVSETNDSGSEALLVKKRRIKHTAQRHPRRAKNTKVENGCHEDEEVTSAGTLRHAQKSFKQGHSKKLTLPTRKRRRLHWTTEEENKLKEGVLKFSKENRNIPWRKILEYGGDVFDDTRTPADLKDKWRTTAAGAGSYHLQYK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0229 509 SMART sant 442 500 IPR001005 -
Acco05g0229 509 MobiDBLite consensus disorder prediction 199 221 - -
Acco05g0229 509 Gene3D - 437 498 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 1 52 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 306 329 - -
Acco05g0229 509 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 176 IPR013083 -
Acco05g0229 509 Pfam Myb-like DNA-binding domain 445 496 IPR001005 -
Acco05g0229 509 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 26 497 - -
Acco05g0229 509 SUPERFAMILY FYVE/PHD zinc finger 85 138 IPR011011 -
Acco05g0229 509 ProSitePatterns Zinc finger PHD-type signature. 88 131 IPR019786 -
Acco05g0229 509 SUPERFAMILY Homeodomain-like 445 497 IPR009057 -
Acco05g0229 509 Coils Coil 211 231 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 362 377 - -
Acco05g0229 509 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 438 502 IPR017930 -
Acco05g0229 509 CDD SANT_TRF 446 496 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 197 221 - -
Acco05g0229 509 ProSiteProfiles Myb-like domain profile. 438 498 IPR001005 -
Acco05g0229 509 MobiDBLite consensus disorder prediction 342 415 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 397 415 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 342 361 - -
Acco05g0229 509 Coils Coil 340 360 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 236 258 - -
Acco05g0229 509 MobiDBLite consensus disorder prediction 22 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0229 Acco-ChrAcco05 2886051 2889639 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco05g0229 Myb_DNA-binding 3.9e-07 CL0123