Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0210 ATGGCTACGCCGCCGCAAGTCATAACATGCAAAGGTGCGGTATGGTGGGGCGGCGGAGATAACGACGTGACGGTGGAAGACATTCAAGTGGATCCTCCCAAAGCAACGGAAGTTCGTGTGAAGATGCTCTGTGCCAGTGTCTGTCACACCGACCTCCTCAGGGCCAGAGGACTTCCACTCCCTTTGTTTCCCCGAGTGTTAGGCCATGAAGGAGTTGGTGTTGTTGAGAGCACTGGGGAGAAAGTAAAAGATGTAAAAGTAGGCGATGTTGTGATTCCAACAAACATTGGAGAATGCCAAGAATGTGAGAACTGCATTTCAAAGGAATCGAACCTGTGCCTGAAATACCCTCTTACATTAAGTGGCTTAATGCTGGATAACACTTCAAGGATGTCCATAAGAGGTCAAAAGATATACCAACTTTTCAGTTGTTCCACATTTGCAGAGTACATGGTCGTTGAAGAAAATTACATCGTCAAAGTTGACCCCAGCGTTGACCCAGCCCATGCTAGCCTCATCTCTTGTGGGTTTTTAACTGGTTTTGGAGCTGCTTGGAAGGAAGCCAAGGTTCAAACTGGCTCTTCCGTCGCTGTGTTTGGCCTTGGTGGTGTTGGATTAGGGGCTATAAGTGCAGCCAAGATGATGGGGGCAAGTAAGATAATTGGAATCGACAAAAATGACATGAAGAAATCAAAAGGAGAAGCTTTTGGAATGACAGATTTTATCAATCCTGATGAAGCCTCTGATAATAAAGCAGTTAAAGAGTTGGTGAAGGAACTGAGTGATGGAATGGGTGTTGATTATTCTTTTGAATGCACTGGAGTTGCTCCTTTACTTACTCAAGCCTTAGAAGCCACAAAATTGGGAAAAGGAAAGACAATATCAGTAGGTGCAGTATCTCAAAAATTTGTGAGCATCGACTTTCTTTCTCTTATCCTTGGGAGATCTTTAAAAGGTTCCATTTTTGGAGGATTAAAACCCAAATCTGATTTGCCCTTCGTAGTTGACAAATGCTTGAAGAAAGAGTTTCCTCTGGACGAACTTCTCACTCATGAGGTGTCACTAGAAGAGATAGGCAAAGCATTGGAGCTATTGAAACAACCAGATTGTCTCAAAGTTGTCATTAACATATCATTATCATATTAA 1146 0.4328 MATPPQVITCKGAVWWGGGDNDVTVEDIQVDPPKATEVRVKMLCASVCHTDLLRARGLPLPLFPRVLGHEGVGVVESTGEKVKDVKVGDVVIPTNIGECQECENCISKESNLCLKYPLTLSGLMLDNTSRMSIRGQKIYQLFSCSTFAEYMVVEENYIVKVDPSVDPAHASLISCGFLTGFGAAWKEAKVQTGSSVAVFGLGGVGLGAISAAKMMGASKIIGIDKNDMKKSKGEAFGMTDFINPDEASDNKAVKELVKELSDGMGVDYSFECTGVAPLLTQALEATKLGKGKTISVGAVSQKFVSIDFLSLILGRSLKGSIFGGLKPKSDLPFVVDKCLKKEFPLDELLTHEVSLEEIGKALELLKQPDCLKVVINISLSY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0210 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Acco05g0210 381 Gene3D - 180 320 - -
Acco05g0210 381 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 320 - -
Acco05g0210 381 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Acco05g0210 381 Gene3D - 14 372 - -
Acco05g0210 381 SUPERFAMILY GroES-like 328 375 IPR011032 -
Acco05g0210 381 PANTHER ALCOHOL DEHYDROGENASE 6 371 - -
Acco05g0210 381 SUPERFAMILY GroES-like 3 192 IPR011032 -
Acco05g0210 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 340 IPR036291 -
Acco05g0210 381 SMART PKS_ER_names_mod 18 375 IPR020843 GO:0016491
Acco05g0210 381 Pfam Zinc-binding dehydrogenase 203 324 IPR013149 -
Acco05g0210 381 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0210 Acco-ChrAcco05 2672325 2675179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0210 37 317 Monolignol Biosynthesis Gene Families AT4G37980 28.169 4.53e-15 73.2