Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0206 ATGGGCCTCTCAAGTCTGCCAGCTCCATCTGAAGGAGTACTGTGTGTGCTTCTTGTCAACACTGCATTTTCCATATCCTTAGTTAAAGGCATCGTTAGAACAATCCTTCACATTGTTGGTATCAGTCTTTCATCATCACCCACCACTCCATCGCCATCACCAACATCACCATCATCAGAATCTTCCCCTTCTCCAGATGTCTCTCACGACCTGCCTGATTCGTTCCAATTCTACCTCTGTTCGCCAGAGAATTACATCGAAGAGTTCAGAAGCCGGACGCCAACAATCCGGTTTGACACTGTGTGTGGCTGCAAACAACCTGCAGAACATGACTGCTCTGTTTGTCTGAGTCAATTTGAACCAGAATCTGAGACAAACCGTTTGTCCTGTGGTCATCTCTTCCACAAAGATTGCTTGGAGAAGTGGCTGGCCTACTGGAACATTACATGCCCACTTTGCAGGACTCCGTTGTTGCCTGAAGAAGAGGTTTCTTCTTGCTTTTGGTGA 507 0.4694 MGLSSLPAPSEGVLCVLLVNTAFSISLVKGIVRTILHIVGISLSSSPTTPSPSPTSPSSESSPSPDVSHDLPDSFQFYLCSPENYIEEFRSRTPTIRFDTVCGCKQPAEHDCSVCLSQFEPESETNRLSCGHLFHKDCLEKWLAYWNITCPLCRTPLLPEEEVSSCFW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0206 168 MobiDBLite consensus disorder prediction 44 68 - -
Acco05g0206 168 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Acco05g0206 168 SUPERFAMILY RING/U-box 111 159 - -
Acco05g0206 168 SMART ring_2 112 153 IPR001841 -
Acco05g0206 168 Pfam Ring finger domain 111 154 IPR001841 -
Acco05g0206 168 PANTHER - 1 166 IPR044249 -
Acco05g0206 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 159 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0206 Acco-ChrAcco05 2625171 2625677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0206 1 168 C3H Transcription Factor Family AT2G04240 60.234 2.76e-62 187