Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0167 ATGTGCTGTTTGTGGTTTATCCAGAAAATAAGAATGAAACCATCGAATAACATATGGATTCGGCGCCAACAATGTCCATGTGGAGATTGGAAATGTTTTATCAAGTATGATGGAGATGATCAGATATCAGTAAGATCTCAGGCCACAAAGACCGATACAGTGCCTTCATCATCATCAGAAGCTGTATTCACTCCTTATGTAGGTCAAATATTCAAAACTGATGATGATGCATTTGAATACTATAGCTATTTTGCCCGGAAGAATGGATTTTCAATCAGAAAAGCTCGCTCAACAGAAAGCCAGCATTTAGGAATATATAGAAGAGATTTTGTTTGTTACAGATCTGGGTTCAATCAACCGAGAAAAAAGGCCAATGTGGAGCATCACAGGGAGCGAAAATCTGTACGATGTGGATGTGATGCAAAATTATACTTGACTAAGGAAATTGTTGATGGTGTTGCTCAATGGTATGTGTCACAATTTAGTAATGTTCATAACCATGAGTTGTTGGAAGATGACCAAGTACGACTATTACCTGCATATCGTAAAATACAAGAGGCTGATCAGGAACGCATTCTTCTACTGTCCAAAGCTGGATTCCCTGTGAATCGTATTGTGAAGGTATTAGAGCTTGAAAAAGGAGTTCAGCCTGGACAGCTGCCTTTCATAGAAAAAGATGTTAGGAATTTTGTTCGGACTTGCAAGAAAGCAGTTCAAGAAAATGATGCTTTACTAAGTGAAAAGAGAGAGAATGATATGCATGAACTTGTGGAGACTTGTAAGGCAATGATAGACAAAGATCCCAATTTTATTTTTGATTATACTGCTGATGAAAATGGCAAAGTTGAAAATATAGCTTGGTCATATGGAGAATCTGTTCGGGCATATTCTGTTTTTGGTGACATGGTTACTTTGGACACCACGTACCGATCTGTTACGTATGGATTACTACTTGGGGTATGGTTTGGCATTGATAATAATGGAAATGCAATAATATTTGGGTTTGTGTTGTTACAAGAAGAAAGTTCTTATTCATATGCATGGGCTTTACAGACATTTGTTCGATTTATGAGAGGGAGACATCCACAAACAATTATAACCGACATAGATCCAACTCTGGGAGATGCTATTTCCAAGGAGTTGTCTGAAACTAAACATGTTATATGCACTTGGCATATTCTATCAAAAATATCAAATTGGTTCTCTGTACCCCTGGGACTACAGTATGCAGATTTTAGGTTGGAGTTCAATATATTATGTCAACTGGAGAGCATAGAAAATTTTGAACATCAGTGGGATCTTTTTGTAGCTCGATTTGGACTCGTTTCCAACAAGCATATAGCTTTGCTATTCTCACTCCGAGCTTCCTGGCCACTCTGCTACGTCAAGAGTTATTTCGTAGCTCGTTCGTTAACAGCTGAGTTTTCAGAGTCTTTGGATTCAACCTTGAAAAGAATTTTAGGTTCACAAACATGTCTGCAAGGATTTTTTGACCAGGTAGGTTTTGTTGCCACCTCATCAATGTCGGCAAGAGAAGGGATGCATTACACGTGTGTAAAGACATGCATGCCTATTGAAGAACATGCAAGGAGTATTCTTACACCTTATGCTTTCAATGTGTTCCAAAATGAAACTGTTCTGTCAGTGCAATATGCAACAACAGAACTCACCAATGGATCCTACCTTGTTCACCACTACAAGATGGATGAAGAGCGCCTTGTGATCTGGGAACCGGCTGATGAACAGATTCAATGTTCCTGCAAGGAATTTGAACATTCAGGCATATTGTGCCGGCATTCGATTCGCGTACTTACGATGAAGAACTACTTCCAACTACCTATGAAATATTTTCTCCCCCGGTGGCGGTCAGAGACTTTGTTGGCTCCTTGTGATGAACAAAATCCTCAGAGCAGTAGTGATGAGTGTGCTCAAGCCTTTCATTCTTTGGCTGCCTCTCTGCTCACAGAATCATTAATCTCCAGGGAACGGTTTAATTATGTTCATAGAGAACTCTCCGGGGTTCTTGAGCGTGTTAAGAATATGGAAGCTGTGGAAGAATTTGCTGTCAATGTGGCGGCTAATAATGTTAATGAATTGTAG 2100 0.3948 MCCLWFIQKIRMKPSNNIWIRRQQCPCGDWKCFIKYDGDDQISVRSQATKTDTVPSSSSEAVFTPYVGQIFKTDDDAFEYYSYFARKNGFSIRKARSTESQHLGIYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGVAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKAVQENDALLSEKRENDMHELVETCKAMIDKDPNFIFDYTADENGKVENIAWSYGESVRAYSVFGDMVTLDTTYRSVTYGLLLGVWFGIDNNGNAIIFGFVLLQEESSYSYAWALQTFVRFMRGRHPQTIITDIDPTLGDAISKELSETKHVICTWHILSKISNWFSVPLGLQYADFRLEFNILCQLESIENFEHQWDLFVARFGLVSNKHIALLFSLRASWPLCYVKSYFVARSLTAEFSESLDSTLKRILGSQTCLQGFFDQVGFVATSSMSAREGMHYTCVKTCMPIEEHARSILTPYAFNVFQNETVLSVQYATTELTNGSYLVHHYKMDEERLVIWEPADEQIQCSCKEFEHSGILCRHSIRVLTMKNYFQLPMKYFLPRWRSETLLAPCDEQNPQSSSDECAQAFHSLAASLLTESLISRERFNYVHRELSGVLERVKNMEAVEEFAVNVAANNVNEL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0167 699 Pfam FAR1 DNA-binding domain 79 170 IPR004330 -
Acco05g0167 699 ProSiteProfiles Zinc finger SWIM-type profile. 561 608 IPR007527 GO:0008270
Acco05g0167 699 Pfam SWIM zinc finger 580 608 IPR007527 GO:0008270
Acco05g0167 699 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 679 IPR031052 GO:0006355
Acco05g0167 699 SMART 26again6 583 610 IPR006564 GO:0008270
Acco05g0167 699 Pfam MULE transposase domain 303 395 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0167 Acco-ChrAcco05 2223764 2226722 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco05g0167 MULE 8.1e-21 CL0219