Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0161 ATGTCTTCCTCCTCATCTTCTTCATCATCTTCTTCCTCACACAATCATAACCATAATAATGCTGGTGACTCTGATATTCCAGGTCCTAGCCGAACAATTCCTCCAGATTCCGACGAACCCTCTTCATCTCGTCCACGTCGAGCCATGAATGAAATCTGGCCTGATCCTTTTCTTGAAGACTTAACCATCCAAGTTGCCATTGATGCTTCTCTCTCCTTTGGTCGTCTCTCTGCTGCTCCTTCACTCGCCAACTTGTTTCAGGTTTGTTCGAGGTGGCAGGCTGTGTCACGGTCGGATCACCTGTGGCAGCGGCTAGCCGGAGCGATATGGCGGCGCGTTAATCGAGCGCGACCCACATGGTACGAAGAGTTCATTCACTGGCATAGAATGGCCAGGAATTTCGCCCGTGGCAGATACGTTTACTCCTCCTTGCAGATTGGACCGTCGGACATGGACGACGACCACTTCAGCACGGTCGTTTGCCGCTGCCTCACGCTCTCCGACGACTATCTCGCCTGCGGCTTCACCGACGGCACCGTCCGCGTCTTCCACCTCGATACACGTTTACACTTCAGGACGTACCGGACCCACCTAGCTAACCGTTTAGGTCCCTTTGCGAGATCCGTGTCTGGCATCGTGATCGCCGACAACAGGCTCATCTTTTCCACGCTGGACGGAGACATCTACGTGGCGGACATCGACGAGCCCACCAATCACGCACGTAGGGCCCGCATCTGTGACGTAGTCAGGAGCGGAGTTCTCGTGGAGTTCGCGGGGCGTGGTCTCTGGTGGGTCGGACTCTTCGCTGGGGCACCGGGCGAGGCGTTCCAGATTTGGGACGCGGAAAACGAACAACTCGTTTTCGTTGGTGGTACCTTGACCGACCCAGAAACCGTTAATGGTTGGCACATGTTGACGGAGTTTGCTGAGCCGGTGGGTCGGATTCGGGTAACAAACGGAGGCCTGGCGGTGGCTTGTACGAGCTCACAACTCGTAGTGTTGGATCTGAACAACCGGGTTTTTTTGCATGAGCTCTGGTCGGCTGTGGGAGGCTTCATTGTGACATCAATGGACGTCAGCGATGAGGCGTTTTTTATTGTGGAAAGGAACGGCGATGCTAGGGTGCGCCGTGCGAGCACGTTAGAGCAGATATGTCAATTTCGGATACGTAATGTGAGGGGCATGACGAGAGGGTGCATGAACATGGGGTACGCGCTAACATGCACCGGTGGGGTGGTGAGGGTGTGGGACGTCGAGCCACCGTGGGGACAGCAGCGTTTGGTGGTGGCAGAGAGGGTGGGGGAGGGGATGGCCATGGTGTGCAACGAGAGACACGTGGCAATTTCTTGTAATGACGGGTCGATACACCTATGGGATTTCGATGTTTAA 1389 0.5522 MSSSSSSSSSSSSHNHNHNNAGDSDIPGPSRTIPPDSDEPSSSRPRRAMNEIWPDPFLEDLTIQVAIDASLSFGRLSAAPSLANLFQVCSRWQAVSRSDHLWQRLAGAIWRRVNRARPTWYEEFIHWHRMARNFARGRYVYSSLQIGPSDMDDDHFSTVVCRCLTLSDDYLACGFTDGTVRVFHLDTRLHFRTYRTHLANRLGPFARSVSGIVIADNRLIFSTLDGDIYVADIDEPTNHARRARICDVVRSGVLVEFAGRGLWWVGLFAGAPGEAFQIWDAENEQLVFVGGTLTDPETVNGWHMLTEFAEPVGRIRVTNGGLAVACTSSQLVVLDLNNRVFLHELWSAVGGFIVTSMDVSDEAFFIVERNGDARVRRASTLEQICQFRIRNVRGMTRGCMNMGYALTCTGGVVRVWDVEPPWGQQRLVVAERVGEGMAMVCNERHVAISCNDGSIHLWDFDV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0161 462 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 152 461 IPR011047 -
Acco05g0161 462 MobiDBLite consensus disorder prediction 1 26 - -
Acco05g0161 462 PANTHER WD40 REPEAT PROTEIN 12, 37 5 419 - -
Acco05g0161 462 Gene3D - 70 134 - -
Acco05g0161 462 SUPERFAMILY F-box domain 75 129 IPR036047 GO:0005515
Acco05g0161 462 MobiDBLite consensus disorder prediction 1 48 - -
Acco05g0161 462 Gene3D - 135 255 IPR015943 GO:0005515
Acco05g0161 462 Gene3D - 266 462 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0161 Acco-ChrAcco05 2091964 2098889 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Acco05g0161 None None None