Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0106 ATGAATTTATTCAAAGTTCAATTATCTAAAGAAAAACTATTTTCACTTTTTATTCTCCTCTCTCTTTCACTCCGATTGTCTCCACCATCTACTTTAGCCGCTTCTCACCATTCTCATTCTCTCGCTCTGTCTCTGTCTCTCTCTCTCTATGTGCAACTTTTGCAACTGTCAAGAAATATGAAAGTGGAAGAGCTCAAATTCGAATTCAATCATCTTCTCCCCCAGCAGCGGCAGAGTAAAGAGAAGACCCATTTGGGTGTCGCCGAACTCTCACCGCCGCCCGTCGTTTGTGACGACGATAATGATGCTGGTGGGTTTGAGACGGTCATTGACGGTAAAAACGAGGACTGTTTCGTCCAACCGGTCAATTTCGCGATGGTTGACAACGGCATTTTCCGGTCCGGTTTCCCTCAACCCGCCAACTTCTGTTTCCTCAAATCCCTCGGTCTCCGCTCCGTCGTATATCTCTGTCCTGAGCCGTATCCGGAGGAAAGCTTAGAGTTCTTGAAGTCAACTGGGATCAAGCTTCATCAATTTGGGATTGATGGTCACAAGGAGCCTTTTGTAAGCATCCCAGAGGACACAGTCCGTGAGGCCCTAAGAGTCGTCCTTGATCCAAAGAACCACCCAGTTTTAATTCACTGTAAACGGGGAAAGCACCGAACGGGTTGTGTGGTAGGCTGCTTCAGGAAGTTACAAAAATGGTGCTTGTCATCAGTGTTTGACGAGTACCGACGCTATGCAGCAGCCAAGGCAAGAGTTTCAGATCTGAGATTCGTGGAATCATTTGATATTTCCAGCTTGTCGGCACATTTGCCCTTGTCATTCACATTTTCACAGAGGTGA 846 0.4657 MNLFKVQLSKEKLFSLFILLSLSLRLSPPSTLAASHHSHSLALSLSLSLYVQLLQLSRNMKVEELKFEFNHLLPQQRQSKEKTHLGVAELSPPPVVCDDDNDAGGFETVIDGKNEDCFVQPVNFAMVDNGIFRSGFPQPANFCFLKSLGLRSVVYLCPEPYPEESLEFLKSTGIKLHQFGIDGHKEPFVSIPEDTVREALRVVLDPKNHPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYRRYAAAKARVSDLRFVESFDISSLSAHLPLSFTFSQR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0106 281 CDD PFA-DSP_Siw14 118 264 - -
Acco05g0106 281 Pfam Tyrosine phosphatase family 119 268 IPR004861 -
Acco05g0106 281 PRINTS Plant and fungal dual specificity phosphatase signature 174 188 IPR020428 GO:0016791
Acco05g0106 281 PRINTS Plant and fungal dual specificity phosphatase signature 155 168 IPR020428 GO:0016791
Acco05g0106 281 PRINTS Plant and fungal dual specificity phosphatase signature 118 135 IPR020428 GO:0016791
Acco05g0106 281 PRINTS Plant and fungal dual specificity phosphatase signature 191 205 IPR020428 GO:0016791
Acco05g0106 281 ProSiteProfiles Dual specificity protein phosphatase domain profile. 123 276 IPR020422 GO:0006470|GO:0008138
Acco05g0106 281 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 119 264 IPR029021 -
Acco05g0106 281 ProSitePatterns Tyrosine specific protein phosphatases active site. 213 223 IPR016130 GO:0016311|GO:0016791
Acco05g0106 281 PANTHER TYROSINE-PROTEIN PHOSPHATASE 94 271 - -
Acco05g0106 281 FunFam probable tyrosine-protein phosphatase At1g05000 117 267 - -
Acco05g0106 281 Gene3D Protein tyrosine phosphatase superfamily 117 267 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0106 Acco-ChrAcco05 1308149 1312223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0106 103 281 Protein tyrosine phosphatase (PTP) family AT4G03960 63.441 1.03e-83 248