Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0090 ATGGCAGAGATTGTACTAGCTGTCGTTGCCAAACTCACAGAATATCTAGTAGATCCATTGGTACGTCAAGGCGAGTATTTGTTTTGTGCTGGCAACATCACAAAAGCTCTAGAAAATGAAAAGCAGAAGCTTGCATCAACACAAGATGGAGTTCAAAAACGTGTTCGGGAAGCACTTAACAAAACTGAAAAAGTCGTCGATGGTGTTGACAAGTGGTTAGCTGAAGTGGAAAGTCATATGGATGAGGTGCAGAAATTGGAGCAGCAAATGAAGGAAAGCAATAGTTGCTTTCAAGGAAGGTGTCCTACTTGGAGGAGATATCGTTTGTGTAGACAAATGACAAAGATGATGGAGGCAATAAAGAATCTCAATCGAAGTAGTGAATTTAATCCCTTTTCCGTCTCTGCCCCAATTCCAGATATAGAGTATTTTTCTTCTGGAAATTTTGTGTATTTCAAATCTACAAAGTTAACTTCAGATCAATTGTTGGCAGCTCTTCAAGAGGATGGTGTTCACATGATTGGATTGTATGGAATGGGGGGCTCCGGTAAAACAACCTTGGTAACAGAATTAGGCAAACGAGCCAAGAAATCAAACCTGTTTGATCGAGTTATATTTGCAACAGTGTCCCAAACTGTGAATATCCGAAAGATTCAAGGTGAGATTGCAGATATGTTAAGTTTGCGATTGGATGAAGAAAGTGAAGCTGGAAGAGCTAGACGCTTATCAATGAGATCGAGCAATGGGGAAAGGATTCTGGTAATATTGGATGATGTGTGGTCCATGATCAACTTGAAGGATGTCGGTATCCCTTTCCAAGATTATTGGATGGGTTGCAAGGTCCTTCTTACCACTCGGCTTCTATCAATATGCAATTTGATGGATTGTGAAAAGAAGATTTCTTTGGATCTATTATCTGATGACGAATCTTGGACATTGTTCCAAAAACATGCTCGTATTGTAGACAAATCATTACATGGTGTGGCACAAGAAATTGTTGGGGAATGTAAAGGCCTTCCTATTGCAATTCAAGCCGTAGGAGCCTCTTTGAAAGGTAAGTCGAAAGAAGAATGGAAGGAGGCATTAGGAAGATTGAGGGATTCAAAACCAATTGATGTGGAACAAGGTGTTAGAGATGCTTTTTCTTGTCTTAAGTTGAGTTACGATTATTTAAGGATTGACGAAGCTAAATCACTCTTTTTGATGTGCTGCATGTATCCCGAAGATGCAAATATCTCTGTTGAAAATTTGTTCAGAATCACAGTAGGTTTGGGCATGTGTGAGGAATTGGGCTCACTTGAAAAAATGAGAAACAAAGTGAATGCATGTATTAATCTTCTTGTAGATTCTTGTTTGCTAATGCGCTCTGAGGAAAAGAAAGGCCGTTTGAGAATGCATGACACACTCCGTGATGTGGCATTGTGGATATCATCCCAACAAAATTGTAGTATTGTAGTGAATCTTGAGAAGGATATGAAGGTGACAGCAGTTGGGTCTATAAAAGGTTGTTATGCATTCACATCTTGGTGCAATCAAGTATCTCAATTTCCTCAATTATTAGATGCTCCCGGACTTGAGATTTTGCTGCTAACTTATGTAGGTGCATGTGAATTATCAGAAGAATGTTTCAGAGGCATGAAAGCACTCAAAGTTGTGCAAATTGACTATATAGATGCCAAACCAGCAGTCCTCAAGTCATTATTGCCACACTCTATGAACTTGCTACCTAATCTACGAACCCTGCGCTTGCGATATTGTCAATTAGGTGACAATTTGTCATGGGTGTTAAGCCTCAAAGGACTAGAAGTTCTTGACTTGAGACATAGTGTTTTTAAGGATCTGCCACATGGATTGGAAGAGTTGAGTAAATTGAAGATGTTAGATTTATCTTTGATCAAAGAGCAAAGTTTCAATATAATAGAACGATCAACGCAACTACAAGAGGTATATGCGTCAGAAATCCAACTAAGTACAACAACTTTAAAAGCTGGCAAATGCTGTTCAAATAATGCTATTTTCCCTAGATTAAAGAGATATCAACTTGAAATTGGGAAATTTGATGACAAATTTTTGGGTGTTATAGATTCGATGGATTTTGGCTGCAACGCTTTGTGCTTGAGAGGGTTCAAAATCTCTACTCTAAGTCCCTTTATTAAGTATCTATTGCAACAAGCAGAAGCTATTTGTCTCTATGAATTTAGTGGTGGTTGCAAAAATATTGCACCAGACATTGTTCAAGTTGTAGGAGGATCAAATGAGTTGACTGGCTTGTGGCTCCATTCTTGTTCAGATTTGGAATGCCTTGCAGATGCAACTTCTCAACACATTGATTTGTTCTTCCCAAAGTTAATCGAGTTAAATTTGAAGCATTTGGCCAATTTGAAAGAAATTTGGCGTGGTCCACCTTTGCTTTCCTTTTTCGAGAAATTACAGGAACTATATGTGTCTCATTGCCCTTTGTTGACCTCACTATTACCAAAGAGTGTTGCTAGAGCCTAG 2499 0.3878 MAEIVLAVVAKLTEYLVDPLVRQGEYLFCAGNITKALENEKQKLASTQDGVQKRVREALNKTEKVVDGVDKWLAEVESHMDEVQKLEQQMKESNSCFQGRCPTWRRYRLCRQMTKMMEAIKNLNRSSEFNPFSVSAPIPDIEYFSSGNFVYFKSTKLTSDQLLAALQEDGVHMIGLYGMGGSGKTTLVTELGKRAKKSNLFDRVIFATVSQTVNIRKIQGEIADMLSLRLDEESEAGRARRLSMRSSNGERILVILDDVWSMINLKDVGIPFQDYWMGCKVLLTTRLLSICNLMDCEKKISLDLLSDDESWTLFQKHARIVDKSLHGVAQEIVGECKGLPIAIQAVGASLKGKSKEEWKEALGRLRDSKPIDVEQGVRDAFSCLKLSYDYLRIDEAKSLFLMCCMYPEDANISVENLFRITVGLGMCEELGSLEKMRNKVNACINLLVDSCLLMRSEEKKGRLRMHDTLRDVALWISSQQNCSIVVNLEKDMKVTAVGSIKGCYAFTSWCNQVSQFPQLLDAPGLEILLLTYVGACELSEECFRGMKALKVVQIDYIDAKPAVLKSLLPHSMNLLPNLRTLRLRYCQLGDNLSWVLSLKGLEVLDLRHSVFKDLPHGLEELSKLKMLDLSLIKEQSFNIIERSTQLQEVYASEIQLSTTTLKAGKCCSNNAIFPRLKRYQLEIGKFDDKFLGVIDSMDFGCNALCLRGFKISTLSPFIKYLLQQAEAICLYEFSGGCKNIAPDIVQVVGGSNELTGLWLHSCSDLECLADATSQHIDLFFPKLIELNLKHLANLKEIWRGPPLLSFFEKLQELYVSHCPLLTSLLPKSVARA 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0090 832 SUPERFAMILY L domain-like 461 824 - -
Acco05g0090 832 Gene3D Ribonuclease Inhibitor 504 831 IPR032675 -
Acco05g0090 832 FunFam Probable disease resistance protein At1g61300 151 299 - -
Acco05g0090 832 Pfam NB-ARC domain 160 389 IPR002182 GO:0043531
Acco05g0090 832 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 831 - -
Acco05g0090 832 Gene3D - 146 301 IPR027417 -
Acco05g0090 832 Coils Coil 69 96 - -
Acco05g0090 832 PRINTS Disease resistance protein signature 336 350 - -
Acco05g0090 832 PRINTS Disease resistance protein signature 246 260 - -
Acco05g0090 832 PRINTS Disease resistance protein signature 619 635 - -
Acco05g0090 832 PRINTS Disease resistance protein signature 173 188 - -
Acco05g0090 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 403 IPR027417 -
Acco05g0090 832 Gene3D - 304 392 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0090 Acco-ChrAcco05 1095385 1097883 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0090 171 652 WRKY Transcription Factor Family AT5G45050 23.946 3.86e-13 71.6