Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0065 ATGGATTTTGAACTGCGGAGAGCGAAAGAAAGACTAGAAAGAGAGCAGAAGGAGTGGATGAAGAAGGCCCGGTTGAAAGTCGAGAAGGAAAGGAAGGCTCAACAAGAGGCTAAGAATCAAAGGGATGCCATTGAAGCTGTTCGAAGATCTCGCCGTATTGATGTTGCCAAAGCCCAACGAAAGGCTGAGGAACAGATGCAAGAAAGCTTACTTACTGGAAGAGGAATTGTGTTTTACCGTTTATTAGAAGCTGTACCTTGTCAAGGTAATGGTGATAAGATCAAACTGCCACCTTCATGCTTCACAGAATTGTCTGATCAGGGTGCCCTTGATAAGGGACCCATGTACTTTCAGTTGTCAGTAGTTCATGGGGAGGGTTCTTCAGGCACAAAACCTACTGGTGAAGAGAACCGAGGGACCACCCATTCAGGAGTTTTAGAATTCACTGCTGATGAAGGTTCAGTAGGTCTTCCTCCTCATGTATGGAATAATTTGTTTGCTGACATCACTCCTAAGTCCCCATTAGTGGAGGTCCGTTATGTTGGGCTTTCAAAGGGGACTTTTGCAAAACTTCAACCTGAAAGGGCAGGATTTTCTGATTTGCCAAATCATAAGGCTATCCTTGAAACAAGTCTTCGGCAACATGCAACTCTTTCTCAAGGTGATGTTTTAACAGTCAACTATGGGGAACTTGGTTACAAATTGAGGGTTCTTGAGCTGAAACCTTCTTCAAGTGTATCTGTCTTAGAAACAGATATTGAAGTTGACGTTGTTAATCCTGATGCAAGCTCAGAAAAGAGTGATCAGCACGTTTTACGCCTGCTTGAATTTGGTGCACCACAATCTGGAATGGTTGACGAAGGAAATTTTGTATACTACAAATTCTCAATAGATAGCAGCACCTGGGAGAGAATTGTTGCTGAGGATTCCAGTATTGAGGTAAAATTGGAAGCTGAGACAGGTGGCGGAGACACTGATCTTTTTATATCTAGACATCCTTTGATATTTCCTACTCGACACCAGCATGAGTGGTCATCCCATGATGTTGGCTCAAAGTCTTTGATTCTTAGCTCTAAAGATAAGAACTTTGGGGCTGAGACGTACAGCATTGGAGTTTTTGGATTTAAGGGAACAACCAAATTCACAATTTTAGTGGCAATTCAGGAAATTTTCCACCAGAAAATTGGTCAACAAGCATCTTCGTCTATGTCACACATGGAGACAGACACTGAACAGTGCCGGAATTGCAGGCATTACATACCTAGTAGGACTATTGCATTGCATGAAGCTTATTGTAGCAGACATAATGTTATATGTCAACATGCTGGTTGTGGAGTTGTTCTTAGGATTGAGGAGTCCAAGAACCACATTCACTGTGACAGGTGTGGTAAAGCTTTTCAGCAGGGAGAATTGGAAAAGCACATGAAGGTTTTCCACGAGCCTCTTCAATGTCCTTGTGGTATAGTCCTTGAGAAAGAACAAATGGTTGAACACCAAGCTTCAGCGTGTCCCATGCGTTTAATTGCATGCCGCTTCTGTGGTGACATGGTTCAAGCTGGAAGTTGTGCCGTTGACATCCGTGATAAGATCAGAGGGTTAACTGAACATGAGAGTGTTTGTGGATCAAGGACAGCCACATGTGATTCTTGTGGGCGTTCAGTGATGTTGAAGGACATGGACATTCACCAAATTGCTGTTCATCAACGAGGTTGA 1713 0.4314 MDFELRRAKERLEREQKEWMKKARLKVEKERKAQQEAKNQRDAIEAVRRSRRIDVAKAQRKAEEQMQESLLTGRGIVFYRLLEAVPCQGNGDKIKLPPSCFTELSDQGALDKGPMYFQLSVVHGEGSSGTKPTGEENRGTTHSGVLEFTADEGSVGLPPHVWNNLFADITPKSPLVEVRYVGLSKGTFAKLQPERAGFSDLPNHKAILETSLRQHATLSQGDVLTVNYGELGYKLRVLELKPSSSVSVLETDIEVDVVNPDASSEKSDQHVLRLLEFGAPQSGMVDEGNFVYYKFSIDSSTWERIVAEDSSIEVKLEAETGGGDTDLFISRHPLIFPTRHQHEWSSHDVGSKSLILSSKDKNFGAETYSIGVFGFKGTTKFTILVAIQEIFHQKIGQQASSSMSHMETDTEQCRNCRHYIPSRTIALHEAYCSRHNVICQHAGCGVVLRIEESKNHIHCDRCGKAFQQGELEKHMKVFHEPLQCPCGIVLEKEQMVEHQASACPMRLIACRFCGDMVQAGSCAVDIRDKIRGLTEHESVCGSRTATCDSCGRSVMLKDMDIHQIAVHQRG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0065 570 Coils Coil 20 50 - -
Acco05g0065 570 Gene3D - 77 183 IPR042299 -
Acco05g0065 570 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 478 526 IPR013083 -
Acco05g0065 570 Pfam Ubiquitin fusion degradation protein UFD1 90 260 IPR004854 GO:0006511
Acco05g0065 570 Gene3D - 185 258 - -
Acco05g0065 570 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 23 515 IPR004854 GO:0006511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco05g0065 UFD1 8.4e-47 CL0402