Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0063 ATGGAAGAACCCAGATTTGGGTCTCTTGTTCTCTTCTTTGTCTTCACGTTGGCTTCAATTTTTGCCAGCGCCAAATCACAGTGTAGCGAGACTTGTGATAAGGCTCTTGCTTCGTACTATATTCAGAATGGTGCGAACCTCACATACATTGCGAGGGTTTTGAAATCCCAGCTTGTTTCAACCGCAGACGATATCGTCAGCTACAACAAAGACAAAGTACCCAATAAAGACAGCCTTTCAGCATTCATAAGAGTCAACGTTCCCTTCCCATGTGAGTGCATTAATGGTGAATTTTTGGGTCACACATTTCAATATGATGTTCAGACACGGGACTCCTACGAGCAGATTGCTACTAGAAACTATGCCAATTTGACCAATGTTGACTGGTTGCGCAAGTTCAATAGCTACCCGCCGGACAATATTCCTGACACTGGAACCTTAAATGTCACGATTAACTGTTCCTGCGGGAATAGAGATGTCTCTACGGATTATGGTTTGTTCATCACGTACCCACTTAGGCCTGGGGAGAGCTTGGGGTCAGTGGCAAGTGACGTGGGTCTTGACACCGGACTATTGCAGAGGTACAACCCGTCTGTGAATTTCAACCAAGGAAGTGGTCTGGTTTTTATTCCGGGCAAAGATCAAAATGGTACCTACGTGCCTCTTCAGTCAAGAAAGGCTGGAGGTCTTTCTACTGGGGCTATAGTTGGAATATCCATTGGAGTAGTAGCAGGGCTTCTGCTATCGGCATTTGGTATATATATTGGTTATTTCAAAAAGAAAAAGACAGGCAAGGTTAAATTACTCCCCCAAGAGTCCCAAGGCCTCTATTCTCAGGACAGGAGGGATACAACCTCCGGTAATGATGAAAATGGAACTTCAGGAGTTGGTGGTCCTGTGTCTCCCATTGCTGGCATTGCTAACATTACAGTGGACAAATCTGTGGAGTTTTCTTATGAAGAACTTGCTACTGCCACAAACAACTTCAATATGGCAAACATGATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGAGGAGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCAACAAGAGAATTTCTGGCTGAGTTGAAAGTCCTGACAAATGTTCATCACCTTAATTTGGTGCGTTTGATAGGCTATTGTGTTGAGGAATCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGTCAGCATCTCCGAAGTTCAGGAAGAGATCCACTCCCCTGGTCTACCAGGTTGCAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATATATTCATGAGCATACAGTGCCAGTATATATCCATCGTGACATAAAGTCGGCTAATATATTAATAGACAAAAACTTCCGTGGCAAGGTTGCAGATTTTGGATTGGCAAAACTGACTGAAGTTGGCAGCGGGACACTTCCCACTGGTCGTCTTGTGGGTACATTTGGATATATGCCACCAGAATATGCTCAATATGGGGATGTTTCTCCTAAAATAGATGTCTATGCTTTTGGAGTAGTTCTCTATGAACTTATCTCTGCTAAGGAAGCTATCGTCAAGATAAATGAATCAATCACAGACTCGAAGGGCCTCATATCTTTGTTTGAGGGAGTTCTTAATCAGCCAAAACCAACCGAAGATCTTCGCAAATTGGTGGACCCAAGACTTGGGGATGACTACCCTATGGATTCAGTTTTCAAGGTGGCTCAACTAGCCAAAGCATGCACGCAGGACAATCACCAATTGCGTCCAACTATGAGATCTATCGTTGTTGCTCTTATGACACTTTCTTCCGCCACTGAGGATTGGGATGTAGGCTCCTTTTATGAAAATACAGCTCTTTTGAATCTTATGTCTGGAAGGTAG 1887 0.4361 MEEPRFGSLVLFFVFTLASIFASAKSQCSETCDKALASYYIQNGANLTYIARVLKSQLVSTADDIVSYNKDKVPNKDSLSAFIRVNVPFPCECINGEFLGHTFQYDVQTRDSYEQIATRNYANLTNVDWLRKFNSYPPDNIPDTGTLNVTINCSCGNRDVSTDYGLFITYPLRPGESLGSVASDVGLDTGLLQRYNPSVNFNQGSGLVFIPGKDQNGTYVPLQSRKAGGLSTGAIVGISIGVVAGLLLSAFGIYIGYFKKKKTGKVKLLPQESQGLYSQDRRDTTSGNDENGTSGVGGPVSPIAGIANITVDKSVEFSYEELATATNNFNMANMIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEESLFLVYEYIENGNLSQHLRSSGRDPLPWSTRLQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLAKLTEVGSGTLPTGRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIVKINESITDSKGLISLFEGVLNQPKPTEDLRKLVDPRLGDDYPMDSVFKVAQLAKACTQDNHQLRPTMRSIVVALMTLSSATEDWDVGSFYENTALLNLMSGR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0063 628 Gene3D Phosphorylase Kinase; domain 1 304 399 - -
Acco05g0063 628 FunFam LysM receptor kinase 2 308 399 - -
Acco05g0063 628 MobiDBLite consensus disorder prediction 273 295 - -
Acco05g0063 628 FunFam PTI1-like tyrosine-protein kinase 3 400 614 - -
Acco05g0063 628 SMART serkin_6 329 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0063 628 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 614 IPR044812 GO:0019199|GO:0045087
Acco05g0063 628 Gene3D Transferase(Phosphotransferase) domain 1 400 617 - -
Acco05g0063 628 Pfam Protein tyrosine and serine/threonine kinase 331 599 IPR001245 GO:0004672|GO:0006468
Acco05g0063 628 SUPERFAMILY Protein kinase-like (PK-like) 312 600 IPR011009 -
Acco05g0063 628 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Acco05g0063 628 ProSiteProfiles Protein kinase domain profile. 329 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g0063 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Acco05g0063 628 MobiDBLite consensus disorder prediction 273 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0063 Acco-ChrAcco05 781396 788438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0063 14 628 Receptor kinase-like Gene Family AT3G21630 58.481 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco05g0063 PK_Tyr_Ser-Thr 9.8e-46 CL0016