Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0043 ATGGTGGCCATGGATAAACCTCTTGTTAACTTGATTGATACAAATGGTCATCACGACTGTCTAGCTTTGTTATGGAAATTTCTAGTTCAGAAGCAGCCTTTCCTTAGCTTTCATTCCAAGATTTGGTCTAGGGGTGTTCAAGCAGTACCGGTCCTGATGTTGGGCAAAATGGAGGATGATTTTGATCCTCAGAAAATCAGAAATTTTTGTATTTTGGCACATGTCGATCATGGAAAGACTACGCTAGCTGATCATTTGATTGCTGCTTCAGGGGGTGGCCTACTTCATCCGAAGTTGGCTGGACGAATTAGGTTCATGGACTATCTTGATGAGGAGCAAAGGAGAGCCATCACCATGAAGAGCTCTTCCATTGGTCTTCATTATAAAGATTACTCTATTAACCTCATAGATTCCCCTGGTCATATGGACTTTTGTAGTGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCATTAATTTTGGTTGATGCCGTTGAAGGTGTGCATATTCAAACCCATGCTGTGTTGCGGCAGTGTTGGATTGAGAAGCTCTCTCCTTGTTTGGTTCTTAATAAGATGGATAGGTTGATTAGTGAATTGAAGTTGAGTCCCATGGAAGCCTATATTCGGTTATTACGGATTGTGCATGAGGTCAATGGGATAGTTAGTACATATAAGTCTGAGAAGTATTTGTCAGATGTAGATTCCTTACTTGCAGGACCTTCAGGCGATGTGACTGCTGATGAAAACATTGACCTCATAGAGGACGATGAAGAAGATATGTTTCAACCACAGAAAGGGAATGTGGCATTTGTGTGTGCACTAGATGGTTGGGGATTCGGAATTCATAAATTTGCTGAAATTTATGCTTCAAAATTGGGGGCTAGTGCTGCTGCATTGCAAAAGGCCCTATGGGGTCCCCGATATTACAATTCAAAAACTAAAATGATCGTTGGTAAGAAAGGTATAGGTGGAGGAAGTAAGGCAAGGCCAATGTTTGTCCAATTTGTTCTAGAACCATTATGGCAGGTATGCCAAGGTGCTCTAGAAGATGATGGTGACAAAGGAATGCTTGAGAAAGTCATTAAGTCGTTTAGTTTGTCTATACCATCTCGTGAATTGCAAAATAAAGACCCTAAGCTTGTGCTTCAAGCTGTTATGAGTCGGTGGCTTCCCCTTTCTGATACAATCTTATCAATGGTGGTGAAGTGTATGCCAGATCCAGTATCTGCACAATCATTTCGTATCTCACGTCTTCTTCCAAAAAGAGTGGTTCTTGATAATGGGGTTGATCAGAATGTGCTTGCAGAGGCAGAGCTTGTCAGAAAATCAGTTGAGTCATGTGATTTGAAACCTGAAGCTCCATGTGTCGCTTTTGTGTCAAAAATGTTTGCCGTGCCAATTAAAATGCTTCCTGATAGGGGTTCACATGGGGAGGTCATGATTCCTTCTGGTGAAGGAGAGGGTGAATTAGATGAGTGTTTCTTGGCATTTGCTAGAATTTTTAGTGGAACTTTGTCTGCAAGACAAAAAGTTTTTGTGCTTTCAGCATTGTATGATCCACTAAAGGGAGAACAAATGCAAAAGCATGTTCAAGAGGCTGAATTACAATCTTTGTATCTAATGATGGGCCAAGGCTTGAAGGTAGTGACATCGGCTAAAGCAGGAAATATTGTTGCTATCCGAGGCCTCGGCCAACATATCCTGAAAAGTGCTACACTCTCATCCAGCAAGAATTGTTGGCCCTTTTCTAGTATGTCTTTCCAGGTTGCCCCAACTTTAAGAGTTGCTATTGAGCCATCTGACCCTGCAGAAATGGGTGCACTATTGAAGGGCTTGAGGCTTCTAAATAGAGCAGACCCCTTTGTTGAGGTCACTGTATCAGCAAGAGGAGAACATGTCTTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTGTGAAAGATTTAAAGGAAAGATTTTCTAAGGTAAGCTTACAAGTCTCTCCACCTCTTGTGTCTTACAAAGAGACCATTGAAGGAGAAGGAGAAGTGTCTAGCATGTTTGAAAATTTGAAAGCTAGTAAGAACTCAGATTATGTTGAAAAAACAACACCAAATGGTAGATGTGTTGTACGTGTGCATGTGATGAAACTTCCATCTTCTTTAACAAAGGTACTTGATGATAGTTCTGATTTATTGGGGGATGCCATTGGATTGAAGTCCGGGCATATGGTTAAAAATTTCGATTCTCAAAGATCAGGTGTCCTTGAAAATGATAATCCAACTGAAGTGCTCAAAAAACGCATAATGGATGCATTGGAAAGTGAGATTTTGAGCAAGAATGAGAATGACAAAGATTATATTGACAAATGTAAGTCAAAGTGGTTAAAACTTTTGAGAAGGATATGGGCACTTGGACCTGGGCAAATTGGTCCCAACATTCTCTTTACTCCTGATATAAAAACAGAGAGTAGTGATAGCTCTATTCTAATACATGGTGATTGTCATGTATCTGAAAGACTGGGTTTTGCTGATGATTATAGTACTTCTAATACTCTAGCCGATATACCATCAAATGTGTATGAAGCATTAAACATGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGGTTCGAACTGGCCACTGCAGCTGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAGGCATACATTTATCCCTATTTAGGGCAGAATAATGAATCAGAACCTCACCAACAATCTGAGCAATATGGCATCTTCGCAGGACAAATAATCACAACCGTCAAAGATGCTTGTAAAGCAGCCGTGCTTCAGAATAGGCCCCGGCTTGTGGAAGCCATGTACTTCTGTGAATTGAATACTCCTACTGAATATTTGGGTTCCACGTATGCTGTACTTGCCCGAAGACGGGCCCGAGTTTTGAAGGAAGAGATGCAGGAAAGTTCCCCTTTCTTCACTGTGCATGCATATGTGCCTGTTTCCGAAAGTTTTGGTTTTGCTGATGAGCTTAGGAGGTGGACTTCTGGAGCTGCTAGTGCACTTCTTGTACTTAGTCACTGGGAAGCACTATCTGAGGATCCTTTCTTTGTACCTAAAACTGAAGATGAAATTGAAGAGTTTGGATATGGCTCTAGTGTGCTTCCTAATACAGCAAGAAAGTTAATTAATGCAGTCAGACGCCGTAAGGGCCTTCATGTGGAGGAAAAAATAGTACAACATGGAACAAAGCAGAGGACACGAGCTCGTAAAGTCTGA 3255 0.4151 MVAMDKPLVNLIDTNGHHDCLALLWKFLVQKQPFLSFHSKIWSRGVQAVPVLMLGKMEDDFDPQKIRNFCILAHVDHGKTTLADHLIAASGGGLLHPKLAGRIRFMDYLDEEQRRAITMKSSSIGLHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKMDRLISELKLSPMEAYIRLLRIVHEVNGIVSTYKSEKYLSDVDSLLAGPSGDVTADENIDLIEDDEEDMFQPQKGNVAFVCALDGWGFGIHKFAEIYASKLGASAAALQKALWGPRYYNSKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVCQGALEDDGDKGMLEKVIKSFSLSIPSRELQNKDPKLVLQAVMSRWLPLSDTILSMVVKCMPDPVSAQSFRISRLLPKRVVLDNGVDQNVLAEAELVRKSVESCDLKPEAPCVAFVSKMFAVPIKMLPDRGSHGEVMIPSGEGEGELDECFLAFARIFSGTLSARQKVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSKNCWPFSSMSFQVAPTLRVAIEPSDPAEMGALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFSKVSLQVSPPLVSYKETIEGEGEVSSMFENLKASKNSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDLLGDAIGLKSGHMVKNFDSQRSGVLENDNPTEVLKKRIMDALESEILSKNENDKDYIDKCKSKWLKLLRRIWALGPGQIGPNILFTPDIKTESSDSSILIHGDCHVSERLGFADDYSTSNTLADIPSNVYEALNMEAKRLESSVISGFELATAAGPLCDEPMWGLAFVIEAYIYPYLGQNNESEPHQQSEQYGIFAGQIITTVKDACKAAVLQNRPRLVEAMYFCELNTPTEYLGSTYAVLARRRARVLKEEMQESSPFFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWEALSEDPFFVPKTEDEIEEFGYGSSVLPNTARKLINAVRRRKGLHVEEKIVQHGTKQRTRARKV 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0043 1084 CDD aeEF2_snRNP_like_IV 663 949 - -
Acco05g0043 1084 CDD EF2 67 290 - -
Acco05g0043 1084 FunFam Elongation factor like GTPase 1 941 1076 - -
Acco05g0043 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 406 IPR027417 -
Acco05g0043 1084 PRINTS GTP-binding elongation factor signature 114 122 IPR000795 GO:0003924|GO:0005525
Acco05g0043 1084 PRINTS GTP-binding elongation factor signature 186 195 IPR000795 GO:0003924|GO:0005525
Acco05g0043 1084 PRINTS GTP-binding elongation factor signature 150 161 IPR000795 GO:0003924|GO:0005525
Acco05g0043 1084 PRINTS GTP-binding elongation factor signature 68 81 IPR000795 GO:0003924|GO:0005525
Acco05g0043 1084 PRINTS GTP-binding elongation factor signature 134 144 IPR000795 GO:0003924|GO:0005525
Acco05g0043 1084 Gene3D - 688 939 IPR014721 -
Acco05g0043 1084 SUPERFAMILY Translation proteins 446 586 IPR009000 -
Acco05g0043 1084 Gene3D Yeast translation eEF2 (G' domain) 282 391 - -
Acco05g0043 1084 SUPERFAMILY Ribosomal protein S5 domain 2-like 666 944 IPR020568 -
Acco05g0043 1084 FunFam Elongation factor 2-like protein 57 270 - -
Acco05g0043 1084 CDD eEF2_snRNP_like_C 945 1023 - -
Acco05g0043 1084 Gene3D Translation factors 408 589 - -
Acco05g0043 1084 SUPERFAMILY EF-G C-terminal domain-like 945 1041 IPR035647 -
Acco05g0043 1084 Pfam Elongation factor Tu domain 2 496 574 IPR004161 GO:0005525
Acco05g0043 1084 Gene3D - 57 264 IPR027417 -
Acco05g0043 1084 CDD EF2_II 455 577 - -
Acco05g0043 1084 Pfam Elongation factor G C-terminus 943 1027 IPR000640 -
Acco05g0043 1084 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 62 1083 - -
Acco05g0043 1084 SMART EFG_C_a 942 1031 IPR000640 -
Acco05g0043 1084 SUPERFAMILY EF-G C-terminal domain-like 590 664 IPR035647 -
Acco05g0043 1084 CDD EF2_snRNP_III 592 663 - -
Acco05g0043 1084 Gene3D - 941 1075 - -
Acco05g0043 1084 Gene3D Elongation Factor G (Translational Gtpase), domain 3 591 667 - -
Acco05g0043 1084 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 64 304 IPR000795 GO:0003924|GO:0005525
Acco05g0043 1084 FunFam Elongation factor like GTPase 1 282 391 - -
Acco05g0043 1084 FunFam Translation elongation factor 2 591 667 - -
Acco05g0043 1084 Pfam Elongation factor Tu GTP binding domain 65 405 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0043 Acco-ChrAcco05 568428 575385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0043 59 1084 Eukaryotic Initiation Factors Gene Family AT3G22980 71.068 0.0 1503