Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0041 ATGGATGTTCAAGTAATAAATGTGGAAGAAGGGATTGATCATCGAGCTACGACCGATGATGGGGATGCAGAACCTAGTGAAGATGAAGTTAATAATGCTGAAAACGCAGGAGTTCATGTTGAGGATGGGATTCCTGAGCCATTTGTTGGCATGGAGTTTGATTCTGAAGATGCTGTGAGGACTTTCTACAATGAGTATGCCAAACGTGTGGGTTTCACCACTAAAGTTGGCCAGCATGGCCGTTCTAAAATTGACGGGGCAATCATGTATCGGGATTACATCTGTGGCAAGGAAGGTTTAAAAAGAAGGCTAGGTGACAGTTGTGATGCAATGATTAAAGCAGAGTTAAAAGGTCAAAATAAATGGGTCATAACAAAGTTTGTGAAGGAGCATAGCCATTCCATGGTGAATCCCAGTAAGGTGCATCATCTTCGGCCTCGTAAGCATTTTTCTAGTGTTGGGAAGACCATGCCTGAAACTTACCAAGGGGTGGGACTTGTCCCAAGTGGTGTCATGTACGTATCCATGGATGGGAATTGTGCTGCTAATGAGAATATTCGTGAAGCTAAGAACACTCCTCCTCTTGAACCAAGTCACACAGCGAGGAATTCTACAATGATGAATAATACTGGTAGGCCTCCTATTCGAAAGAGGACATTAGGGAGAGATGCTCAGAACCTGCTGGAATATTTTAAGAAAATGCAGGCCGAGAATCCTGGTTTCTTCTATGCCATACAACTTGATGAAGAAAATCGTATGTCTAATGTATTTTGGGCTGACGCAAGATCACGGATGGCATACAGCCATTTCGGTGATGCAGTGACCCTGGACACAACATACAAAATGAATCGATACAAAGTTCCTTTTGTTCCATTTACTGGGGTGAACCATCATAGTCAAATGATTTTGTTCGGTTGTGCACTTCTTTTGGATGATTCTGAGGCTTCGTTCTTGTGGCTCTTTAAAACTTTTTTGACAGCAATGAATGACTGTCAACCTGTTTCTATAATTACAGATCAAAACAAATCCACACAGTCAGCAGTGTCTCAAGTTTTTCCCCAAACACGCCACTGTATAAGTAAGTGGCATGTCTTGAGAGAAGGCCAAGAAAAGTTGGCACATGTTTGTCACGCTCATCCAAACTTTCAGGTTGAACTTTATAATTGTATTAACCTAACGGAGACCATTGAGGAATTTGAGTCATCTTGGAGTTTCATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCAGTCATTGTATGATGCTCGTGCTAAGTGGGTTCCAGCATATTTTCGTGATTCATTTTTCGCTGCAGTATCTCCTAATAGAGGATTTGACAGTTCTTTTTTTGACGGTTATGTCAACCAGCAGACAACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGTTTGAGAAGGAAATAGAAGCAGATTTTGAAACTATCTGCACCACACCGGTGTTAAAGACACCTTCGCCCATGGAAAAACAGGCTGCTAGTCTTTATACAAGAAAAATATTTTCTCTGTTTCAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGAGGTGAATAGCACGTTCAGAGTTGCAAAATTTGAAGATGATCACAAGGCATATGTTGTGACATTAAACCATTCAGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCGGGCATTATTTGCAAGCATGTCTTAACCGTTTTCACAGTAACCAATGTACTTACATTACCACCCCATTACATCTTAAGACGGTGGACAAGAAATGCAAAAGTTGGTGTTGGATCAGATGAACGTGCTGGTGAATTACATGGACGGGAGTCTCTAACATCAAGATATAGCAATCTATGTAGGGAGGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTCAATGCCCTTAAAGAAGGTGAGAAGAAGATTGCAGCTGCGAAGAAAAGTGTTTCCAAAGTTTCTCCTCCTAGCAATCAGACTGGTGGGACTGCTTATGATGACAAAAAATCTTCTATGTCAGCTTCAGATACAACCCCTCTTCTATGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAATGATGCTGGTGCTCCTGTTCAATCTGTTGCTGATCTAAATTTGCCACGAATGGCTCCTGTTTCCCTTCAACGAGATGATGGTCCATCTGACAGCATGGTGGTTCTCCCCCATCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTAGCTGTTATGAATTTGAAGTTGCAAGATTACAGCAGGACTCCACCGGCAGAATCTGAAGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCGATGTTGAAGTCTATGGCCTACATTAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATTCTGAGACAACTTCTGGGGAGTCTGAAGTGAAGTTTCAGGTGTCCAGGGATACATTGGGTGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTTTCTCATGCTGGAGACACGCAGACAGAGCCTGTATGGAAAAGGCATCGAAAATAA 2643 0.4139 MDVQVINVEEGIDHRATTDDGDAEPSEDEVNNAENAGVHVEDGIPEPFVGMEFDSEDAVRTFYNEYAKRVGFTTKVGQHGRSKIDGAIMYRDYICGKEGLKRRLGDSCDAMIKAELKGQNKWVITKFVKEHSHSMVNPSKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSMDGNCAANENIREAKNTPPLEPSHTARNSTMMNNTGRPPIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENRMSNVFWADARSRMAYSHFGDAVTLDTTYKMNRYKVPFVPFTGVNHHSQMILFGCALLLDDSEASFLWLFKTFLTAMNDCQPVSIITDQNKSTQSAVSQVFPQTRHCISKWHVLREGQEKLAHVCHAHPNFQVELYNCINLTETIEEFESSWSFILDKYELRRNDWLQSLYDARAKWVPAYFRDSFFAAVSPNRGFDSSFFDGYVNQQTTLPMFFREYERALENWFEKEIEADFETICTTPVLKTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDHKAYVVTLNHSELRANCSCQMFEYSGIICKHVLTVFTVTNVLTLPPHYILRRWTRNAKVGVGSDERAGELHGRESLTSRYSNLCREAIRYAEEGAVAVETYNAAFNALKEGEKKIAAAKKSVSKVSPPSNQTGGTAYDDKKSSMSASDTTPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDSMVVLPHLKSMTWVMENKNSTPGNRVAVMNLKLQDYSRTPPAESEVKFQLSRVSLEPMLKSMAYISEQLSTPVNKVAVINLKLQDSETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAGDTQTEPVWKRHRK 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0041 880 MobiDBLite consensus disorder prediction 9 29 - -
Acco05g0041 880 SMART 26again6 563 590 IPR006564 GO:0008270
Acco05g0041 880 MobiDBLite consensus disorder prediction 196 212 - -
Acco05g0041 880 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 664 IPR031052 GO:0006355
Acco05g0041 880 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Acco05g0041 880 MobiDBLite consensus disorder prediction 190 218 - -
Acco05g0041 880 Pfam MULE transposase domain 274 365 IPR018289 -
Acco05g0041 880 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Acco05g0041 880 MobiDBLite consensus disorder prediction 667 700 - -
Acco05g0041 880 MobiDBLite consensus disorder prediction 671 700 - -
Acco05g0041 880 Pfam SWIM zinc finger 552 586 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0041 Acco-ChrAcco05 542717 547601 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco05g0041 MULE 1.9e-24 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0041 05 542717 547601 Acco05g0041 05 542717 547601 ECH