Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0034 ATGATGAATTTTCTTTTGACTTCTAACAGGGGTAAGGCTCAGCAAAATGAAAGTACACATAGCTGCAGCTATTGCTCGAAGGTATTCAGCAGCTACCAGGCGCTTGAAGGCCATTTAAGGTCACACCAAAACATGATGCAGAAATTTCCATATTTTCAAAGCCACAGCAACTCGACCGATGATACCGTCCCTTATTTTAATTCATCATTGAAGGGCCTAAGCATAACTTCCTCGGGAGCCCTTATGAACAATTACTGTGCATCTGAAGACAACCATAGTGGAAATGAAACTGAATTGGTCCTGCCCTCACGTCTCTCGCATGCCCCCAACTATTATGCATCCTTGAGTTCAGTAACTCTATCTGGTGCATTGATGCCTGCATCTCTTCCTTTGTCTCGTCCTATAGATAATGTCAATTTTAATGATCCTTTGGGTCATGCACCGCATGGAGGCTCAACCGGTTCTTGTCAGTTTGATGTTGAGGCTGTACAAGGATTTATAAAGCGTTATCCATATCTCTCTGAACATTTCCTTGAGACTATGAAGGACCACAACTGCAGTAACCATCCAGTTTCATGTGTCATTTGTTCTGTCTGTCCTTGTTATGCGATGAATAACATCTTGGAGTGCTTGGGTTTCTTTCCTCGTACAAGACTTGACATAAAGAAATTTCTTGGGATGGAGTGGCCTGTTTTTACAAGCCTCTTGCCTCCACCCCCACTTCATAGTCAATTTACTGTCCCAATGTGTCCAAACAAATATATCAAGGCCCTAACTTCTGGGAGAGAGAACAAGCGTTGTTGTTTGTGCCGAGATTTAGCCGTGATGAAAAGGCCGGGGGTGAGCTCCATTTCACAAGTTTATTGGGTAGGAGATCATCCACCTCAAAAGGAGTTGCTTCTCTTTAAGGATTCAGATAACTCTGGTTCTGGATCAGAGGCTCTAACAGGTGGAGAGGAGAAATGTGAAGACAATCTGGATCTCTCACTTCATCTATAG 999 0.4324 MMNFLLTSNRGKAQQNESTHSCSYCSKVFSSYQALEGHLRSHQNMMQKFPYFQSHSNSTDDTVPYFNSSLKGLSITSSGALMNNYCASEDNHSGNETELVLPSRLSHAPNYYASLSSVTLSGALMPASLPLSRPIDNVNFNDPLGHAPHGGSTGSCQFDVEAVQGFIKRYPYLSEHFLETMKDHNCSNHPVSCVICSVCPCYAMNNILECLGFFPRTRLDIKKFLGMEWPVFTSLLPPPPLHSQFTVPMCPNKYIKALTSGRENKRCCLCRDLAVMKRPGVSSISQVYWVGDHPPQKELLLFKDSDNSGSGSEALTGGEEKCEDNLDLSLHL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0034 332 Pfam C2H2-type zinc finger 20 43 - -
Acco05g0034 332 Gene3D Classic Zinc Finger 2 65 - -
Acco05g0034 332 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Acco05g0034 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
Acco05g0034 332 SMART c2h2final6 20 42 IPR013087 -
Acco05g0034 332 SUPERFAMILY beta-beta-alpha zinc fingers 16 44 IPR036236 -
Acco05g0034 332 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 1 78 IPR030374 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco05g0034 zf-C2H2_6 5.4e-10 CL0361