Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g0027 ATGTCTCACTCACCGACCAATGCTTTTGTTGCCGGTGACTTGCTATGCAGTAACGATGCTGATGAAGTGATCGTCGGTGAAAACCACTTGATGCCATCGCCATACCTGCTTTCATGTTCACGCACATTACAAGTTTCATCCGGTAATGATGTTCCTCTCAATCAACTACCTCTATTGTTTTCTGTCTTGAACTCCACTTCCAGTAACCTCTCACGTGTCTCTTCTATCCAAGAAAATCAAGCGGCAAAAATGGAGGAACCTAAAGTGCCTCTATTATTGGACCTTCAATTAGTGGATCCCAGATTTTTTGCTCTGAAGCTACATTTTGAGTTACTGAAGCTTTTGCAAGGAAAAACCCTTTGCATGAGCTTCGCTCGTTGCTTTGAGTTACTGTTTGCTTTGTTACGTCTTGTACTACCTTTGGCTAATCTCCGAAGAGTTATTTGCTTAATTTCACTAGTTCCTGTATTGGATTTGGTTCTGACTGGTTTGTCCATAGTCTTGCTCTATCTCTTGGAGCCATTGCTTAAACTGTTCCTATTATTTATGGACATCGAAGTGTTTGATCATGAAAACGGTATGGATTCATTTGAGCCAGAAGGAAATGGGTCGGAGGGCTCGTTGCCGCCGCCACCTCCTGTCCCACCAAATGCTGTGCCAGTGATAGCTGATCAAGGACTTCCTATTGAACCTGTCAAGAAGGTTTCCCGGGTTCCGATTGCCAGACGAGGATTGGGATCCAGAGGAAGTAAATTTCGTATTTTAACTAACCACTTCAAAGTCAATGTTAAGATCAACGATGGCTATTTCTTCCACTACAGTGTATCATTTTCTTACGAAGATGGTCGCCCTGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATTGACAGGGTGCAGGAGACTTATGACTCTGAGTTAGCAGGGAAGGACTTCGCCTATGACGGGGAGAAGAGTTTGTTTACTGTTGGCCCTCTTCCTCGAAACAAGCTTGAATTCACTGTTGTTTTGGAGGATCTCAAATTTAACAGGAATAATGGCAATTGTAGCCCTGATGGCTGTGGGAGTCCGAATGAGAGCGACAAGAAGAGGATGCGACGCCCAAATCGTTCAAAAACATTTAAAGTGGAGATCAGTTATGCTGCTAAAATCCCTATGCAGGCTATCACTAATGCACTGCGCGGTCAAGATTCTGAAAATTTTCAAGAAGCCATCAGAGTTCTTGATATTGTATTAAGGCAACATGCTGCCAAGCAAGGCTGTTTACTCGTTCGCCAATCTTATTTCCACAATGATCCAAGGAGTTTTACTGGCGTTGGAGGTGGTGTTTTAGGGTGCAGAGGATTCCATTCAAGTTTCAGAACTACCCAAAGTGGTTTATCACTTAATATAGATGTATCCACTACCATGATCGTACAGCCTGGGCCCGTGGTGGACTTTTTAATTGCCAACCAGAATGTACGAGATCCTTTTTCAATAGACTGGGCAAAGGCCAAAAGGACGCTTAAAAATCTGAGGGTTCAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAGAGAGCAGACGTTTTCTCTGAAAAGAAAAAGTGGAAAGGATGATAGTGATGACTCTCAGGAAGTGACTGTTTATGATTATTTTGTTAATCATCGTAAGATAGAGCTCCGTTATTCTGGTGATCTTCCGTGTATCAATGTCGGGAAACCGAAACGTCCTACTTTCTTCCCACTTGAGCTCTGCTCTTTGGTGTCCCTACAACGATACACAAAATCACTCTCTACACTTCAAAGGTCTTCGCTGGTGGAGAAATCTAGGCAGAAGCCTCAAGAGAGGATGAGAGTTTTGTCTGATGCTTTAAAAAACAACAAATATGATTCCGAACCCATGCTTCATAATTGTGGGGTTTCAATAAGCAATAGCTTTACTGAAGTGGAGGGTCGCGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGACCGGGAGGAGAACCCAAGAAATGGGAGATGGAACCTGAATAATAAGAAAATAGTGCAGCCATCAAAGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCCCGTTGTGATACACGTGGGCTTGTGCGAGATCTGATTAAATGCGGAGGAATGAAAGGAGTTCTCGTAGAAGAACCGTTTTGTGTCTTTGAAGAAAAACCTCAGTTTAGACGTGACCCTCCTGTGATGAGAGTGGACAAAATGTTTGAAGAGATCCAGTCGAAACTTCCTGGCCCCCCCAAGTTCCTTCTTTGTCTTCTTCCTGAACGGAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAGAATCTTTCGGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCTACAAGGGTCAATGACCAATATCTGACAAATGTTCTGATGAAGGTCAATGCTAAGCTTGGTGGTCTGAATTCAATGCTATCAATTGAACATACACCGTCAATTCCTGTTGTTTCCAAAGATCCCACCATCATTCTTGGCATGGACGTGTCACATGGATCACCAGGACAGTCTGATATCCCTTCAATTGCAGCGGTAGTCAGCTCTAGACAGTGGCCTCTGATATCCAAGTATAAGGCATGTGTCCGTACCCAGTCTCCAAAGGTTGAAATGATCGATAATTTGTTCAAGCCAGTGTCTGAGAAGGAGGATGAAGGCATCATCAGGGAAATTCTGATTGACTTCTATACAACATCTAAGAGAAAACCACAAAATATAATAATATTCAGGGATGGGGTAAGCGAATCGCAGTTCAATCAAGTATTGAACATTGAACTCAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTGGTGATTGTTGCCCAGAAAAACCACCACACAAAATTTTTCCAGCCTTCATCTCCTGACAATGTTCCACCAGGGACCGTTATTGATAATAAAATATGCCATCCGCGGAACTATGACTTTTATTTATGCGCACATGCAGGAATGATTGGAACTACCAGGCCCACGCATTACCATGTTCTGTTAGATGAGATTGGCTTCTCGCCTGATGATCTGGAGGGACTTGTGCATTCGTTATCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTCGTTGCTCCTGTATGCTATGCACACTTGGCTGCAACTCAGATGGGACAGATGATCAAATTTGAAGACAAGTCTGAGACTTGTTCGAGCCATGGTGGGCTGTCATCTGCTGGAGCGGTTCCTGTGCCCCAGTTGCCCAAATTGCAGGAGAACGTCCGCAACTCCATAAAATGGCTAAAACAACCTCGGTTATTTCAGCATACTGTCCATAATAGAAGTCCGTGCATAAACGGCTCTCACGGTAAGACTCCTCTCTCCCCATCTCACTTCGACCCTAGCTTTCTCCTTTTCCAAGCCGTTCCTTATTCCTCTTTCTTTCTTCCGCGAGGCTTCTTGCCTCGGTTAGCTGCAGGTTATAACATGGTTGAACAGGGCAGCCAGAGGAAGAGGCCAAACATACTGGTGACTGGCACACCAGGGACAGGAAAGACAACAATGTCCTCTGCTCTAGCAGAAGCAATCCAACTTCGCCACATCAATATTGGAGAATTGGTCAAAGAGAAGAACTTGCATGATGGATGGGATGATGAGCTTGATTGCTACGTCATTAATGAAGACTTGGTCTGTGATGAGCTTGAAGACATTATGGAAGGAGGAGGGAACATTGTGGACTACCATGGCTGTGATTTCTTTCCCGAGCGATGGTTTGATTGTGTGGTGGTTCTTCAAACAGATAACTCTGTCTTGTATGACCGTTTGAGCAAGAGAGGGTACACTGAGTCAAAGCTTTCCAACAATATTGAGTGCGAAATCTTTCAAGTACTGCTTGAAGAAGCCAAAGAAAGTTACCCAGAGGACAGAGTTATCGCATTAAGGAGTGATACTATTGAAGACATGAATTTAAATATTGCGACTCTAACAGAGTGGGTGGGAAACTGGCATCCCTGA 4023 0.4387 MSHSPTNAFVAGDLLCSNDADEVIVGENHLMPSPYLLSCSRTLQVSSGNDVPLNQLPLLFSVLNSTSSNLSRVSSIQENQAAKMEEPKVPLLLDLQLVDPRFFALKLHFELLKLLQGKTLCMSFARCFELLFALLRLVLPLANLRRVICLISLVPVLDLVLTGLSIVLLYLLEPLLKLFLLFMDIEVFDHENGMDSFEPEGNGSEGSLPPPPPVPPNAVPVIADQGLPIEPVKKVSRVPIARRGLGSRGSKFRILTNHFKVNVKINDGYFFHYSVSFSYEDGRPVEGKGVGRKIIDRVQETYDSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDLKFNRNNGNCSPDGCGSPNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSENFQEAIRVLDIVLRQHAAKQGCLLVRQSYFHNDPRSFTGVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRVQTSPANQEYKITGLSDLPCREQTFSLKRKSGKDDSDDSQEVTVYDYFVNHRKIELRYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRSSLVEKSRQKPQERMRVLSDALKNNKYDSEPMLHNCGVSISNSFTEVEGRVLQAPRLMFGDREENPRNGRWNLNNKKIVQPSKIEKWAVVNFSARCDTRGLVRDLIKCGGMKGVLVEEPFCVFEEKPQFRRDPPVMRVDKMFEEIQSKLPGPPKFLLCLLPERKNSDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKVNAKLGGLNSMLSIEHTPSIPVVSKDPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYKACVRTQSPKVEMIDNLFKPVSEKEDEGIIREILIDFYTTSKRKPQNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFQPSSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSPDDLEGLVHSLSYVYQRSTTAISVVAPVCYAHLAATQMGQMIKFEDKSETCSSHGGLSSAGAVPVPQLPKLQENVRNSIKWLKQPRLFQHTVHNRSPCINGSHGKTPLSPSHFDPSFLLFQAVPYSSFFLPRGFLPRLAAGYNMVEQGSQRKRPNILVTGTPGTGKTTMSSALAEAIQLRHINIGELVKEKNLHDGWDDELDCYVINEDLVCDELEDIMEGGGNIVDYHGCDFFPERWFDCVVVLQTDNSVLYDRLSKRGYTESKLSNNIECEIFQVLLEEAKESYPEDRVIALRSDTIEDMNLNIATLTEWVGNWHP 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g0027 1340 Pfam N-terminal domain of argonaute 252 411 IPR032474 -
Acco05g0027 1340 Hamap Putative adenylate kinase. 1176 1340 IPR020618 GO:0004017|GO:0005524|GO:0016887
Acco05g0027 1340 Gene3D - 654 819 - -
Acco05g0027 1340 Pfam Argonaute linker 1 domain 423 471 IPR014811 -
Acco05g0027 1340 ProSiteProfiles Piwi domain profile. 758 1065 IPR003165 GO:0003676
Acco05g0027 1340 SUPERFAMILY Ribonuclease H-like 742 1063 IPR012337 -
Acco05g0027 1340 FunFam Protein argonaute 7 468 594 - -
Acco05g0027 1340 Pfam Mid domain of argonaute 668 709 IPR032473 -
Acco05g0027 1340 Pfam AAA domain 1178 1297 - -
Acco05g0027 1340 Gene3D - 825 1103 IPR036397 GO:0003676
Acco05g0027 1340 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 230 1067 - -
Acco05g0027 1340 CDD Piwi_ago-like 634 1059 IPR045246 -
Acco05g0027 1340 SMART Piwi_a_2 758 1065 IPR003165 GO:0003676
Acco05g0027 1340 FunFam Protein argonaute 3 826 1104 - -
Acco05g0027 1340 MobiDBLite consensus disorder prediction 347 368 - -
Acco05g0027 1340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1174 1329 IPR027417 -
Acco05g0027 1340 CDD PAZ_argonaute_like 473 589 - -
Acco05g0027 1340 SMART DUF1785_2 421 473 IPR014811 -
Acco05g0027 1340 MobiDBLite consensus disorder prediction 196 215 - -
Acco05g0027 1340 Pfam Argonaute linker 2 domain 616 662 IPR032472 -
Acco05g0027 1340 ProSiteProfiles PAZ domain profile. 498 590 IPR003100 GO:0005515
Acco05g0027 1340 FunFam Adenylate kinase isoenzyme 6 homolog 1170 1340 - -
Acco05g0027 1340 Gene3D paz domain 467 594 - -
Acco05g0027 1340 SUPERFAMILY PAZ domain 468 630 IPR036085 GO:0005515
Acco05g0027 1340 Pfam Piwi domain 759 1065 IPR003165 GO:0003676
Acco05g0027 1340 Gene3D - 1168 1340 IPR027417 -
Acco05g0027 1340 Pfam PAZ domain 477 606 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g0027 Acco-ChrAcco05 390818 408249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g0027 242 1098 Eukaryotic Initiation Factors Gene Family AT5G43810 35.050 4.40e-157 497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g0027 05 390818 408249 Acco05g0027 05 390818 408249 ECH