Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2890 ATGTTTCCCATAGCATGCTTGTGTTCATGGCTTATGCTTTTGATTGGTGATCTGTTTTTAGCTGAGGGAGGTAAAGTGGTTGCTAAATCCAACAGACCAGCCCCAGCCAAATATTCAAAGGAGTCTTTACAAAAGAAAGGTGGTCCTCCCGCTGCATTTCCAATGTCAACTGACAAGAAAGTGCGTGATCATCCCTTTGAGAAAGAAAAGAAGAAAGATATGCCTCCTCCAAGAATGCAATTTGATGTCAAAAACCGAGTGGAGAAGGCTAGAAGACGTGCAATAGTGAATCAAACTGAAGCTACAAACAGAGTTGAGTTATTTCGGCACTTGCCACAATATGAATATGGGAATCAGCTTCCTGATCTTCAATTAAAGTTTTTCCAACTTGACTCAGTGCATCCAGCTGTGCTGAAGGTTGGATTGTTTTATTTGGCTGGAGATATATTAGGGGGCAATGGTCGATGTATTGCAATGCTAAGAGCATTTCAGGGAGCCATTAAAGACTACAGAACACCATGTGATAAGACCCTTGATAGGGATTTAACTGCAAAAATCAGCAGTTATGTTTCCTTTTTTACTCAATGTAGACCTCTTTCCATTAGCATGGGAAATGCGATTAGGGTTGTAAAGAGTCGAATTGCCAAGTTGCCTCCAAGTTATTCTGAATCAGAGGTAAAAACAACTCTCTGTTCTGATATTGATCGGTTCATCAACGAAAAAATTGTTCTTGCTGATAAGGTGATTGTTGGGCACGCTGCTACAAAGATTCGAGATGGAGATGTTGTTCTTACCTATGGATCGTCATGTGTTGTTGAGATGACACTTTTACATGCCTTCGAGCTTGGGAAACAATTCTGTGTTGTGTTGGTAGACTCACGACCGAAGATTGAAGGCCGGGTTGGAACTGCATGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTTTTGATCTGTTGTGAAGCATACAAGTTTCATGAAAGAGTGCTACTTGACTCAATATGTTCCAATGAACTAGGTAGTTCAGAAGGAGGTGACAAGGAAGCTGTTGCTGGGGGTTCCTGGGAGAATGGATTTAAGTTCTTTGGACAATTGGACAAGTACGATGCTACCCCTTCAGATTATGTCTCTATGATTGTTACAGATTATGGCATGACTCCGTGTGGTTCACTATATAGAATTCCAATTTGTTGTGGTCTTCTGTCTGTATGCTTCTTTGGGGACAAATGGATGCCAAGTTCCTCCTACAAGAGTGCGAATATGGAAGAGAATACGCATTGA 1284 0.4151 MFPIACLCSWLMLLIGDLFLAEGGKVVAKSNRPAPAKYSKESLQKKGGPPAAFPMSTDKKVRDHPFEKEKKKDMPPPRMQFDVKNRVEKARRRAIVNQTEATNRVELFRHLPQYEYGNQLPDLQLKFFQLDSVHPAVLKVGLFYLAGDILGGNGRCIAMLRAFQGAIKDYRTPCDKTLDRDLTAKISSYVSFFTQCRPLSISMGNAIRVVKSRIAKLPPSYSESEVKTTLCSDIDRFINEKIVLADKVIVGHAATKIRDGDVVLTYGSSCVVEMTLLHAFELGKQFCVVLVDSRPKIEGRVGTACVAMVAHAFRVPVLICCEAYKFHERVLLDSICSNELGSSEGGDKEAVAGGSWENGFKFFGQLDKYDATPSDYVSMIVTDYGMTPCGSLYRIPICCGLLSVCFFGDKWMPSSSYKSANMEENTH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2890 427 Gene3D - 242 300 IPR042529 -
Acco04g2890 427 Pfam Initiation factor 2 subunit family 151 300 IPR000649 GO:0044237
Acco04g2890 427 MobiDBLite consensus disorder prediction 30 79 - -
Acco04g2890 427 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 36 300 - -
Acco04g2890 427 SUPERFAMILY NagB/RpiA/CoA transferase-like 120 395 IPR037171 -
Acco04g2890 427 Gene3D - 301 396 IPR042529 -
Acco04g2890 427 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2890 Acco-ChrAcco04 45474715 45477950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2890 65 392 Eukaryotic Initiation Factors Gene Family AT5G38640 60.733 9.89e-156 453