Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2884 ATGCTGGCTGTCCGAGTCTCAACTTGTTCTCTTATCCTGCGAAACCATCACCATGTCCTTCCCTATATTATCAACCATGTCCTCCTCCCTCCTCCGCATCTTCTTCCTGCATCTCAGTTCTTTGACCGGTTTCATCGTCTTCTATCTGCGCGTTCGGCAGTTTCTGGTTCTTCGTCCTCATCGGTTCGACCCCTTACGCTGGTGAGTTTGCTCTTTCTTCGTCCGTTTTCGTCGGTCTGTGAAACAATGGATCCGATGGACATCATTGGGAAATCGAAGGAAGATGCGTCGCTTCCTAAAGCAACTATGACAAAAATTATTAAAGAAATGTTACCCCCTGATGTACGTGTTGCAAGAGATGCTCAAGATCTGTTGATTGAGTGTTGTGTAGAGTTTATAAATCTTGTGTCATCGGAGTCCAATGAAGTCTGTGGCAGAGAGGAGAAAAGGACAATTGCACCTGAGCATGTACTGAAGGCTTTAGAGGTTCTTGGATTTGGTGAGTATATTGAGGAAGTTTATGCAGCATATGAACAACACAAGATTGAGACCATGCAGGACTCTCTTAAAGGAGGGAAATGGAGCAATGGAGCAGAAATGACGGAGGAGGAAGCTTTAGCTGAGCAGCAAAGGATGTTTGCGGAGGCACGTGCCAGAATGAATGGTGAGGCACTTGCTTCCACCAAGCAGCAGTCAGATGGTGACCAAAGTTTAGAGAGCTGA 723 0.462 MLAVRVSTCSLILRNHHHVLPYIINHVLLPPPHLLPASQFFDRFHRLLSARSAVSGSSSSSVRPLTLVSLLFLRPFSSVCETMDPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCGREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKIETMQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGEALASTKQQSDGDQSLES 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2884 240 MobiDBLite consensus disorder prediction 217 240 - -
Acco04g2884 240 MobiDBLite consensus disorder prediction 224 240 - -
Acco04g2884 240 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 96 161 IPR003958 -
Acco04g2884 240 Gene3D Histone, subunit A 87 230 IPR009072 GO:0046982
Acco04g2884 240 FunFam Negative cofactor 2 beta 88 225 - -
Acco04g2884 240 SUPERFAMILY Histone-fold 94 225 IPR009072 GO:0046982
Acco04g2884 240 PANTHER PROTEIN DR1 HOMOLOG 83 239 IPR044255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2884 Acco-ChrAcco04 45391980 45395457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2884 83 236 CCAAT-DR1 Transcription Factor Family AT5G23090 81.818 3.11e-91 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco04g2884 CBFD_NFYB_HMF 2.6e-21 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2884 04 45391980 45395457 Acco04g2884 04 45391980 45395457 ECH