Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2882 ATGGCGGGTCGTAGAAGAAAGAGGCACCACTTTAGCAGAATCCATGCGTTTGCGTGTGGGAAAGCTTCGTTTAGAGGGGAGCATTCGCTGATTGGAGGCCCTGGATTCTCCAGGATAGTGTTATGCAACGAAACAGAACGTGGTGTGGAGGATTATGGCGATAATTATGTAAGAACCACTAAATATACACTAGCCTCCTTCCTCCCAAAGTCGCTATTCGAGCAATTTAGGAGGGTTGCTAACTTCTATTTCCTCGTATGTGCCATATTGTCCTTCTTCCCCGTTTCTCCTTATTCAGCTGTCAGCAATGTCGTTCCTCTGGTGCTTGTGGTTGCTGTAAGTATGGGGAAAGAAATGGTTGAAGACTGGAAACGCAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATTGCGGAGGAGGCGCTTTTGATCATTCTAAATGGAGGCATCTAAAAGCTGGAGACATAGTAAAGGTGGAAAAAGATGATTTTTTTCCCGCCGACCTCGTCTTACTTTCATCGAGTTATGATGATGCTGTTTGCTATGTTGAGACCATGAATCTTGACGGAGAAACAAATCTTAAGTTGAAACAAGCTCTGGAAGAAACTTCCAGACTGCAAGAAGATTCAGGCTTTCAGAATTTCAAAGCAATGATCAAATGTGAAGATCCGAATGCAAATTTGTACTCCTTTGTGGGCACTCTGCAGCTTGAAGATCAGCAGTACCCCCTTGCTCCTCAGCAGCTTCTTCTCAGGGACTCAAAGCTGAGGAATACCGATTTTATCTATGGTGTGGTAATCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGACCCTCCTTCAAAGAGAAGCAAAATTGAGAAACGAATGGACAGGATAATCTACTTCCTGTTCTTTGTCTTAATTATTATTTCTCTTATTGGATCCATTTTCTTTGGAATTTCAACTAGGCAAGACCTTGAAAATGGAAGAACAAAAAGATGGTACCTTAGACCAGATAATACTACAGTATACTATGATCCAAATCGAGCAGCAGTTGCAGCAATTTTGCATTTCCTGACCGCACTTATGTTATATGGTTACTTGATTCCCATTTCCTTGTATGTTTCGATAGAAATAGTGAAAGTTCTTCAGAGCACATTCATTAACCAAGATGTGAACATGTATTATGACGAAACTGACAAGTCCGCTCATGCTCGTACGTCGAATTTGAATGAAGAACTTGGCCAAGTTTGTACCATACTTTCAGATAAAACAGGAACTTTAACCTGTAATTCTATGGAGTTTATCAAGTGTTCCATTGCCGGGGTTGCTTATGGCCGTGGAGTTACAGAAATTGAGAGAGCTCTAGTTAGAAGAAAAGAATCTCCTTTATTACAAAATATGACAGATGAGGGTGATCATGTTGCAGGAAAGCCATCCACCAAAGGATTTAACTTTAATGATGAAAGGATTATGAACGGAAATTGGTTCAATGAGCGTCATGCAAATGAAATCCAGAACTTTCTGCGTTTGCTGGCTGTATGCCATACTGCAGTGCCTGAAGTTGGCGAAGAAACAGGTAATGTCTCATATGAAGCGGAATCGCCAGATGAGGCAGCTTTTGTAATTGCTGCAAGAGAACTTGGATTTGAATTTTATGAAAGGACACAGACAGCAATTTTGATACGTGAGTTCAACCCCAAATTAAAGATGAAGGAGGAAAGATCCTACAAACTCTTAAACATGATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTCAGAGATGAGGAGGGGAAACTATTACTACTTTCCAAAGGTGCTGATAGTGCCATGTTTGAAAGACTTGGAAAGAACGGAAGGATGTTTGAAGAGAAGACTAAGAAGCATATTGACGAGTATGCTGAAGCAGGTCTGAGGACATTGTTGCTTGCATATCGTACACTTGATGAGGAAGAATATAATCAATTTAACAAAGAATTCACAGAGGCCAAGAACTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTCGCAGAAAAGATTGAGAAGGATTTGATTCTTCTTGGCGCTACTGCAGTTGAGGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGTTAGCACAAGCTGGAATTAAGCTATGGGTTTTGACCGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGTAGTTTACTAAGGCAAGGAATGACGCAAGTTATAATTAGCTCAGACACTCCAGAAATCAAATCACTGGAGAAAATGGAGGACAAGTCTGCTGCTGCGATGGCAATTAAGGCAAGTGTTGTTCGTCAGATAAAGGATGGGAGGGCATTGCTTTCTAAGTCAGATAAAAACTCTGAGGCATTAGCTCTAATCATCGATGGGAAGTCGCTTGCATATGCACTCCAGCATGATGTGAAGGATTTGTTCCTCGAACTCGCTGTTGGTTGCGCCTCTGTTATATGCTGTCGTTCGTCTCCCAAACAGAAAGCTCTTGTTACAAGACTGGTGAAGACTAAAACTGGTAGTACAACTCTTGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATCGGAATTGGCATCAGCGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGCGACATCGCTATTGCCCAATTTCGGTTTCTTGAGCGCCTACTTCTTGTGCATGGTCATTGGTGTTACAGAAGGATATCAAAAATGATTTGCTACTTCTTTTACAAGAATATTGCCTTCGGTTTCACTCTCTTCTTCTTTGAGGTGTATGCATCGTTCTCGGGGCAAGCAGCCTATAATGATTGGTTCCTGTCACTATACAACGTATTCTTCACTTCACTTCCTGTGATTGCCTTGGGAGTGTTTGACCAGGATGTCTCTGACAGATTATGTCTCAAGTTTCCACTACTGTATCAAGAAGGCGTCCAAAATGTCCTATTCAGCTGGAAACGAATTCTGGGTTGGATTTTGAACGGGCTGTTGACTTCTGCCATCATCTTCTTCTTCTGTATCAAAGCGACAGAGCATCAAGCCTTCCGAAAGGGTGGGGAAGTTGCAGGTCTAGAAATCTTGGGAGCCACCATGTACACATGTGTTGTTTGGGTGGTCAACAGTCAGATGTCTATATCTGTAAGCTACTTCACATACATGCAGCATATGTTCATATGGGGTAGCATTCTATTTTGGTACGTATTCCTCTTGGCATATGGAGCCATGGATCCCACCATTTCAACCACAGCCTATATGGTCTTCATTGAAGCTCTTGCTCCCTCCCCCTCTTACTGGACCATCACTCTGCTTGTGCTTTTTTCCTGCCTTCTTCCATACTTCGCCATTTCTTCCATCCAGATGAGGTTTTTCCCCATGTACCATCAAATGATACAGTGGATAAGAAATGACGGGCAAACCAGGGATCCTGAATTCTGTGATATGGTGAGACAGAGATCCATACGGCACACCACCGTTGGCTACACTGCTCGTTTTGAAGCATCCAAACGATTTGAAGACAAGCTTTATCAGCAGCATTAA 3567 0.4211 MAGRRRKRHHFSRIHAFACGKASFRGEHSLIGGPGFSRIVLCNETERGVEDYGDNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVLVVAVSMGKEMVEDWKRKQQDIEMNNRKVKVHCGGGAFDHSKWRHLKAGDIVKVEKDDFFPADLVLLSSSYDDAVCYVETMNLDGETNLKLKQALEETSRLQEDSGFQNFKAMIKCEDPNANLYSFVGTLQLEDQQYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDRIIYFLFFVLIIISLIGSIFFGISTRQDLENGRTKRWYLRPDNTTVYYDPNRAAVAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSTFINQDVNMYYDETDKSAHARTSNLNEELGQVCTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEIERALVRRKESPLLQNMTDEGDHVAGKPSTKGFNFNDERIMNGNWFNERHANEIQNFLRLLAVCHTAVPEVGEETGNVSYEAESPDEAAFVIAARELGFEFYERTQTAILIREFNPKLKMKEERSYKLLNMIEFSSARKRMSVIVRDEEGKLLLLSKGADSAMFERLGKNGRMFEEKTKKHIDEYAEAGLRTLLLAYRTLDEEEYNQFNKEFTEAKNLVSADREQIIEEVAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMTQVIISSDTPEIKSLEKMEDKSAAAMAIKASVVRQIKDGRALLSKSDKNSEALALIIDGKSLAYALQHDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISKMICYFFYKNIAFGFTLFFFEVYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSDRLCLKFPLLYQEGVQNVLFSWKRILGWILNGLLTSAIIFFFCIKATEHQAFRKGGEVAGLEILGATMYTCVVWVVNSQMSISVSYFTYMQHMFIWGSILFWYVFLLAYGAMDPTISTTAYMVFIEALAPSPSYWTITLLVLFSCLLPYFAISSIQMRFFPMYHQMIQWIRNDGQTRDPEFCDMVRQRSIRHTTVGYTARFEASKRFEDKLYQQH 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2882 1188 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 1134 IPR023298 -
Acco04g2882 1188 SFLD p-type atpase 403 907 IPR044492 -
Acco04g2882 1188 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 481 694 IPR023299 GO:0000166
Acco04g2882 1188 CDD P-type_ATPase_APLT_Dnf-like 54 1016 - -
Acco04g2882 1188 ProSitePatterns E1-E2 ATPases phosphorylation site. 423 429 IPR018303 -
Acco04g2882 1188 FunFam Phospholipid-transporting ATPase 113 283 - -
Acco04g2882 1188 Gene3D - 111 283 - -
Acco04g2882 1188 FunFam Phospholipid-transporting ATPase 534 692 - -
Acco04g2882 1188 Gene3D - 688 896 IPR023214 -
Acco04g2882 1188 NCBIfam phospholipid-translocating P-type ATPase 52 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco04g2882 1188 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1134 IPR032630 -
Acco04g2882 1188 SUPERFAMILY HAD-like 419 911 IPR036412 -
Acco04g2882 1188 NCBIfam HAD-IC family P-type ATPase 823 939 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco04g2882 1188 SUPERFAMILY Calcium ATPase, transduction domain A 143 281 IPR008250 -
Acco04g2882 1188 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1145 - -
Acco04g2882 1188 Gene3D - 528 669 IPR023299 GO:0000166
Acco04g2882 1188 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Acco04g2882 1188 PRINTS P-type cation-transporting ATPase superfamily signature 421 435 - -
Acco04g2882 1188 SFLD C1.7: P-type atpase like 403 907 - -
Acco04g2882 1188 FunFam Phospholipid-transporting ATPase 692 896 - -
Acco04g2882 1188 Pfam Cation transport ATPase (P-type) 515 618 - -
Acco04g2882 1188 Pfam Phospholipid-translocating ATPase N-terminal 43 102 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2882 Acco-ChrAcco04 45373124 45378113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2882 10 1186 Primary Pumps ATPases AT3G25610 69.050 0.0 1744