Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2867 ATGGGGTGCTCGTTTTCTGGGTTGAATGCGTTGTATGACAACGTAAACGGGGGCACCAACGTGTGGATCAACGAGAACCGATTCCGCATCGTGAGGAAGCTCGGCGAAAGTGGCTTTTCCTACATCTACTTGGTCAAGGAGGTGGTCACCGACTCCTCTCCCGCCTTATCTGGCGGTGGTCTCTCTAAGAAGCTCAAAGACTCTTCCCATGTCTCTGACGATGGTACTTACGCCATGAAAAAGGTCCTCATTCAAGACAAGGAACAGCTGGAGTTGGTGAAGGAGGAGATCCGTGTTTCATCACTCTTCAGTCATCCTAATTTGCTCCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCAACCAAAGAAACATCTTGGACCGATGAAGCATACCTGTTGTTTCCTGTTCATTTGGATGGAACATTGCTCGACATTGCCCAAACTATGAAAGCCAAGAAAGAGTTCTTTTCCACGTCAGATGTGCTTCACATATTTCAGCAGCTTGCTGCAGGACTCATGCACATGCACAATATGGATCCTCCTCACGCACATAATGACGTCAAACCTGGTAATGTGGTAATAACACGCAGAAAGGGACAACCACCTCTTGCCATACTCATGGATTTTGGTAGTACTCGACCTGCCAGGCAGCAAATTCGCTCTCGATCTGAGGCAATGCAGTTGCAGGAATGGGCTGCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTATGGGATTGCCCTAGCCATGCTGATATAGATGAGAGGACTGATGTCTGGTCACTGGGATGCACGCTGTATGCAATAATGTACGGGGTATCTCCGTTTGAATATGCACTTGGAGAAGCTGGTGGAAGCCTGCAAGTGGCCATTGTAAATGCTCAAATCAAATGGCCGGCTGGACCTAAGTCTCCATATCCTGATGCTCTTCATCAGTTTGTGACATGGATGCTTCAACCTCAGGCTGCTGTGCGGCCCCGAATGAACGATATCATCATCCATGTTGAAAAATTGATCGCCAAGTTCTCTCATTGA 1041 0.4793 MGCSFSGLNALYDNVNGGTNVWINENRFRIVRKLGESGFSYIYLVKEVVTDSSPALSGGGLSKKLKDSSHVSDDGTYAMKKVLIQDKEQLELVKEEIRVSSLFSHPNLLPLLDHAIISVKPTKETSWTDEAYLLFPVHLDGTLLDIAQTMKAKKEFFSTSDVLHIFQQLAAGLMHMHNMDPPHAHNDVKPGNVVITRRKGQPPLAILMDFGSTRPARQQIRSRSEAMQLQEWAAEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGEAGGSLQVAIVNAQIKWPAGPKSPYPDALHQFVTWMLQPQAAVRPRMNDIIIHVEKLIAKFSH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2867 346 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
Acco04g2867 346 ProSiteProfiles Protein kinase domain profile. 28 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2867 346 Pfam Protein kinase domain 68 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2867 346 CDD STKc_16 27 342 - -
Acco04g2867 346 SMART serkin_6 28 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2867 346 SUPERFAMILY Protein kinase-like (PK-like) 23 336 IPR011009 -
Acco04g2867 346 Gene3D Phosphorylase Kinase; domain 1 12 136 - -
Acco04g2867 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2867 Acco-ChrAcco04 45234779 45238901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2867 153 345 MAP Kinase Kinase Kinase AT2G43850 27.320 2.90e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Acco04g2867 Pkinase 7e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2867 04 45234779 45238901 Acco04g2867 04 45234779 45238901 ECH