Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2841 ATGGCTGTCGATAATGATTTTATTGACCAGAGAATGCTCTTCACCGCTTTCGTACTTCTCTTGTTAATAATAATAATTGCCTTCTTTTTCTGGCATTTTTACAGTTATTATCTCCGCCGCCGAGCCTCCTATCAAAGACGTTCCTTTACCAGTCACGTTCTCCATCCTCCTTCTCCCGCCCGTTCTCCCCTCCATCCTTTGCTTTTCTATCTCCTTCCCACCTCCACCTACTCCTCCTCCCCCGGAGAAGACGAGCATAGTCAAGCTCCGCCGGAGTGTGCCATCTGCTTGGACGAGTTCAAAGAAGGAGACAAAGGGCGAGTGCTCCCGAACTGCGACCACTTCTTTCACCTCGATTGTATCGATGAGTGGCTCCGAACAAACAAGACTTGCCCATTGTGCCGAGAGGTCGTTAAACCGCCGCCGAGAATCACGCCGCCGCATGAAAATACAGAAGCGTCTGCTGGAGAAGGTGTGTTGGAGAATTCTTTGAATGTAAATCTTCCTCCCCCAATTTGGTGCCCGGGAAACACAAACACAAGGCAGGTGATAGAATCAGAACATGTGGTAATAGAGATTCTGGAGGAAGACCATCGCCGGGGTCACAGGCTGATGAGCACGTCATGGCGCGAGTTAGCGTGGTCTTCGTTCTTTTTCTTCCTACTATAA 669 0.4948 MAVDNDFIDQRMLFTAFVLLLLIIIIAFFFWHFYSYYLRRRASYQRRSFTSHVLHPPSPARSPLHPLLFYLLPTSTYSSSPGEDEHSQAPPECAICLDEFKEGDKGRVLPNCDHFFHLDCIDEWLRTNKTCPLCREVVKPPPRITPPHENTEASAGEGVLENSLNVNLPPPIWCPGNTNTRQVIESEHVVIEILEEDHRRGHRLMSTSWRELAWSSFFFFLL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2841 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 141 IPR013083 -
Acco04g2841 222 SMART ring_2 93 134 IPR001841 -
Acco04g2841 222 CDD RING-H2_EL5-like 92 135 - -
Acco04g2841 222 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 141 IPR044675 -
Acco04g2841 222 SUPERFAMILY RING/U-box 92 147 - -
Acco04g2841 222 SMART ringv_2 92 135 IPR011016 GO:0008270
Acco04g2841 222 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Acco04g2841 222 Pfam Ring finger domain 92 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2841 Acco-ChrAcco04 45052617 45053285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2841 8 168 C3H Transcription Factor Family AT2G42360 35.802 2.95e-29 107