Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2817 ATGAGACTAGGGGAGGAATTGTTGGATCTTGTTGGTTATTCTCCTATAGTAGCAATCAAATCGCTCAAGGTTGGGGACTTTCAAGGTGTTTCCTTGTCGACTATAAGTAAAAGTCTAGTGCTGGTAAATCCAGACATACCTGAAGCAAAGAAGCTTAGATGCTGGTACGATTCTGAAGGTAAAGATGTATCATTGGCACCCATAAGCACGGGCACAAGCTCGGTATCCATGAATGGAATGAGATCAGTGTATTCAGACCGTGTTTCACTTTCTCATATTACCTCAAACCCATCCTTAGGGGAGGACAAGCCTGCATTTTTCAGCATTAGGGCACATATAAGCTACATCAAGCCTGACCAGACAATGTGGTACCGAGCTTGTAAAACTTGCAACAAGAAAGTCACCGAATCCATCGGCGCTGGGTATTGGTGTGAAGGCTGCCAGAAAAATTATGAAGAGTGCAGTTTAAGTGTTTCTCAAAATGAATACAATAATGAGAAAAGGCAGAGGATAACAGCCCGGGCAGTTGTACCGATGGACTTTGCTGCTGAATCAAGATTTCTCTTGGAAGAGATATCAAAGATGAGAGCTTCACAATAA 600 0.4267 MRLGEELLDLVGYSPIVAIKSLKVGDFQGVSLSTISKSLVLVNPDIPEAKKLRCWYDSEGKDVSLAPISTGTSSVSMNGMRSVYSDRVSLSHITSNPSLGEDKPAFFSIRAHISYIKPDQTMWYRACKTCNKKVTESIGAGYWCEGCQKNYEECSLSVSQNEYNNEKRQRITARAVVPMDFAAESRFLLEEISKMRASQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2817 199 SUPERFAMILY Nucleic acid-binding proteins 85 195 IPR012340 -
Acco04g2817 199 Gene3D - 69 152 IPR012340 -
Acco04g2817 199 CDD RPA1_DBD_B 15 57 - -
Acco04g2817 199 Gene3D - 153 197 IPR012340 -
Acco04g2817 199 CDD RPA1_DBD_C 90 194 IPR047192 -
Acco04g2817 199 PANTHER REPLICATION FACTOR A 1, RFA1 9 157 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Acco04g2817 199 Pfam Replication factor-A C terminal domain 106 156 IPR013955 -
Acco04g2817 199 Gene3D - 3 68 IPR012340 -
Acco04g2817 199 SUPERFAMILY Nucleic acid-binding proteins 11 63 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2817 Acco-ChrAcco04 44831351 44832953 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2817 3 156 Core DNA Replication Machinery Family AT5G08020 69.481 2.80e-77 241