Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2803 ATGGCGATGGCTGCTCTGAGACGGGAAGGGAGGCGCTTGGCCCCTCTCATCTCTCCCCAACCGTTGACCGCTCTCCGATCCTCCCTCATATCTGAGGAGCAAATCCCCCAGGGTGTGCGCTATATTTCCACTCAAGTAGTCAGAAATCGGATGAAGAGTGTGAAGAATATTCAGAAAATTACAAAGGCAATGAAGATGGTTGCAGCGTCAAAACTGCGGGCTATTCAAACTAGAGCTGAAAACTCTCGTGGCCTATGGCAGCCATTCATTGCACTTCTGGGTGACACTCCCAGTATTGATGTGAAGAAGAATGTCATTATTACTGTTTCTTCTGACAAAGGTCTATGTGGTGGAATCAATTCTACCGCTGTCAAGATAAGCAGGGCTGTGCACAAACTGAACTCTGGGCCTGATAAAGAGACAAAGTATGTCATTTTGGGAGAGAAAGCTAAGGCTCAATTGGTACGTGACTCAAAGAAAGACATTGAGATCATCTTAACTGAGCTGCAGAAAAATCCTTTAAATTATACCCAGGTCTCTGTCATTGCAGATGATATCTTAAAGAATGTGGAGTTTGATGCCTTGAGGATTATTTTCAACAAGTTCCAATCAGTTGTGTCATTTTTGCCTACCATGTCAACCATATTATCTCCCGAGATTGTGGAGAGAGACGCTGAATCTGGGGGCAAGCTTGGAGAATTGGACTCGTATGAGGTGGAAGGTGGTGAGACCAAGTCAGAAATACTTCAAAATCTGGCTGAGTTCCAGTTCTCTTGTGTCCTTTTCAATGCGGTATTGGAGAATGCTTGCAGTGAGCAAGGTGCAAGGATGTCTGCTATGGACAGTTCTAGCAGAAATGCTGGGGATATGCTTGACCGCCTCACCCTCACCTATAACAGAACTCGTCAAGCATCCATTACCACTGAATTGATTGAGATTATCTCAGGAGCATCAGCTCTAGAAGGTTGA 969 0.451 MAMAALRREGRRLAPLISPQPLTALRSSLISEEQIPQGVRYISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFIALLGDTPSIDVKKNVIITVSSDKGLCGGINSTAVKISRAVHKLNSGPDKETKYVILGEKAKAQLVRDSKKDIEIILTELQKNPLNYTQVSVIADDILKNVEFDALRIIFNKFQSVVSFLPTMSTILSPEIVERDAESGGKLGELDSYEVEGGETKSEILQNLAEFQFSCVLFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALEG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2803 322 Hamap ATP synthase gamma chain [atpG]. 41 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 ProSitePatterns ATP synthase gamma subunit signature. 306 319 IPR023632 -
Acco04g2803 322 PANTHER ATP SYNTHASE GAMMA CHAIN 30 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 44 320 IPR035968 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 Gene3D ATP synthase, gamma subunit, helix hairpin domain 47 317 - -
Acco04g2803 322 PIRSF ATP_synthase_gamma 10 320 - -
Acco04g2803 322 PRINTS ATP synthase gamma subunit signature 193 210 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 PRINTS ATP synthase gamma subunit signature 101 120 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 PRINTS ATP synthase gamma subunit signature 267 286 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 PRINTS ATP synthase gamma subunit signature 298 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 FunFam ATP synthase gamma chain 275 317 - -
Acco04g2803 322 Gene3D - 67 279 - -
Acco04g2803 322 Pfam ATP synthase 45 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 NCBIfam ATP synthase F1 subunit gamma 43 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 CDD F1-ATPase_gamma 43 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
Acco04g2803 322 FunFam ATP synthase subunit gamma 67 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2803 Acco-ChrAcco04 44739894 44745571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2803 12 320 Primary Pumps ATPases AT1G15700 29.494 1.43e-29 114