Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2784 ATGGAAGTATCGAAGTATGTGTGTAAGTTCTGCCGGAAAAGCTTCCCGTGCGGCAGATCTTTAGGCGGTCATATGAGGTCGCACGTCTCCAGCGGCAATTATAATAATAATGACAATTCAGCTGCAGCGGCGGCGGCGGAGGATTCAGTTGCAGCATCTGCAACTGGCTACGGTCTGAGAGAGAAGAGGATCAAGACTTGGAGAGTCGCCGATCCCGGTGACGGCGGCGGAGCTGAAGCATCACCGAACAAGTTGTGCAAGCAGTGTGGTAAAGCGTTTCACTCTTGGAAGGCTCTGTTTGGTCACATGAAGTGTCACTCCGAGAAAGGAAGAGCTTCTGTTAGCTTGGAAGATCAAGATTCATGGACTGTCACGGATAGCCAATCTGACGACAACGAAGCTTCCAGGCCAAGAACAAGATCCAAGAGAAAAAGAACTAATTACACTTCGTCTCTGTCCTTCTCCATTCCTTCCCCTTCTGTTTCTGAAATCGAGCAAGAGCAACAAGAGGTCGCTTTGAGCTTGATCATGCTTAGCAGGGGATCTCCAGAAACGAGGTCCGAGAAGAAATCAAAAGCATCAGAGCTTTTGAGTCCAAGAAGTGGAATAAGGAGGAGCAAGACGAAGAAGCTGGATTTTAAATCTGCAATGGAGTGTTGTGAGGAAGATGATAGAGAGCAAGGGAAAAGGAATTTCAAATTCTTGGGTTCCGAGTTGGACTCAAATAAGAGCTCTCACAGAAGAGGGAAATTCGAGTGTACTACTTGCAACAAGATCTTCGATTCTTACCAAGCTCTTGGCGGCCATAGAGCCGGCCACAAGAAGATCACCAGAGACTGTTTTGTTCCAATTGACGAGACCAGTGAGAATTCCATAAAACCTGATTTGTCTCAACATGAAGCAATTTCTGGTTTAGATCTTCATGAATGCTCAGTTTGCCTCAAGAGTTTTCCATCTGAGCAGGCATTGGATGAGCATAAGAGATCCCATCCAGCTGAAGCATCTGAGAGTAGAAAAGCTGAAAGAATTAGTAGAGATTTGATTGACAAACCAGTAGAGAAGATTAGGGAATTGATTGATCTTAATCTTCCAGCTGATGATGCGGAAGTTGCAGAAGAGAAAGAAGAAAGCAACAATAATATCAATTCTGAGTGTTACAGATCATCATCACCCTGGTGGGCAAGAAGCATCCACAACAAGCAGGAGGTTCTAGTAGGCCTATTCTCTAACTAA 1233 0.4526 MEVSKYVCKFCRKSFPCGRSLGGHMRSHVSSGNYNNNDNSAAAAAAEDSVAASATGYGLREKRIKTWRVADPGDGGGAEASPNKLCKQCGKAFHSWKALFGHMKCHSEKGRASVSLEDQDSWTVTDSQSDDNEASRPRTRSKRKRTNYTSSLSFSIPSPSVSEIEQEQQEVALSLIMLSRGSPETRSEKKSKASELLSPRSGIRRSKTKKLDFKSAMECCEEDDREQGKRNFKFLGSELDSNKSSHRRGKFECTTCNKIFDSYQALGGHRAGHKKITRDCFVPIDETSENSIKPDLSQHEAISGLDLHECSVCLKSFPSEQALDEHKRSHPAEASESRKAERISRDLIDKPVEKIRELIDLNLPADDAEVAEEKEESNNNINSECYRSSSPWWARSIHNKQEVLVGLFSN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2784 410 MobiDBLite consensus disorder prediction 146 165 - -
Acco04g2784 410 MobiDBLite consensus disorder prediction 323 342 - -
Acco04g2784 410 Pfam C2H2-type zinc finger 6 28 - -
Acco04g2784 410 Pfam C2H2-type zinc finger 308 332 - -
Acco04g2784 410 Pfam C2H2-type zinc finger 86 108 - -
Acco04g2784 410 Pfam C2H2-type zinc finger 251 275 - -
Acco04g2784 410 SMART c2h2final6 251 273 IPR013087 -
Acco04g2784 410 SMART c2h2final6 84 106 IPR013087 -
Acco04g2784 410 SMART c2h2final6 308 330 IPR013087 -
Acco04g2784 410 SMART c2h2final6 6 28 IPR013087 -
Acco04g2784 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Acco04g2784 410 ProSitePatterns Zinc finger C2H2 type domain signature. 253 273 IPR013087 -
Acco04g2784 410 SUPERFAMILY beta-beta-alpha zinc fingers 5 33 IPR036236 -
Acco04g2784 410 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Acco04g2784 410 ProSitePatterns Zinc finger C2H2 type domain signature. 310 330 IPR013087 -
Acco04g2784 410 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Acco04g2784 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 393 - -
Acco04g2784 410 SUPERFAMILY beta-beta-alpha zinc fingers 85 273 IPR036236 -
Acco04g2784 410 MobiDBLite consensus disorder prediction 116 130 - -
Acco04g2784 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Acco04g2784 410 Gene3D Classic Zinc Finger 2 111 - -
Acco04g2784 410 Gene3D Classic Zinc Finger 248 330 - -
Acco04g2784 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 251 273 IPR013087 -
Acco04g2784 410 MobiDBLite consensus disorder prediction 112 165 - -
Acco04g2784 410 MobiDBLite consensus disorder prediction 181 201 - -
Acco04g2784 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 308 335 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2784 Acco-ChrAcco04 44608718 44609950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2784 5 182 C2H2 Transcription Factor Family AT1G26610 37.563 1.43e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco04g2784 zf-C2H2_6 1.1e-10 CL0361