Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2774 ATGTCAGAGCAGGAAACACAGTCATGGGGCTTCATCTTCGTCTGTTTCTTAATCTTTTTTTCAGGTAAAATTGTTGCCCAAGATTTTCTGGACACAGAGAGACAAATTCTTCTACAACTGAGAACTTATCTAAACCATCAAACTCGAACAGATGGAGGAAGATACAAACTCTGGAACACAACCAGCTCAAATCCGTGTCAATGGCCAGGAATCTCATGCAGGCGCCCTACAGGGACAACAACCTCGGCGGCGGCGAGAGTGGTCGGAATAGACCTTTCCGACAGCAGCATCGCTGGCGAGATTTTTAAGAATTTCTCGCAGCTTGCCGAGCTCACTCACCTTGACCTTTCCACAAACACCATCATCGGAGAAATCCCAACGGATCTAAGTCGATGCAGTAACCTCGTATATCTCAATCTCTCCCATAATCTTCTGGAGGGAGAGATTGATTTTACTGGATTGACAAGGTTAGAGACACTAGACTTGTCGCAAAACAGGCTTCATGGTGATATAGGGTCGAATTTTCCTGCCATATGTGACAACTTAGTAACTTTGAATGTTTCTGGGAATAACTTCACCGGTTCCATTGACCATTGTTTCGATCAGTGTTCAAAATTGCAGTACTTGGATTTGAGCACCAACGATATCAGTGGAGGTATCTGGATGGGATTTGCGAGGCTGAAGGAGTTTTCAGTTTCAGAGAACTCTCTCACTGGGCCTCTCATTGAACAAGCATTCCCAGAAAATTGTAACCTCGAAGTCCTCGACGTTTCATACAATGGATTTACAGGAATTGCTCAGAAGAATGTCAGTAAATGTAAGAATCTAGCGATTCTGAATCTTTCAAGTAACAAATTTTCTGGGGATATCCCCATTGAATTGGGATCAATCTCAAGCCTCCAAGCTTTGTACTTTGCCAACAATACATTTTCAAGAAGCATCCCAGAGACACTTTCAAACTTGACAAACCTAAATTTCTTGGATTTGAGCGGTAATGGTTTTGGTGGAGAGATACAAGACACACTTGGGAAGCTCAAGCAAGTAAAGTTCCTACTTTTGCATTCAAATGCTTACACTGGAGGATTAAACTCATCAGGCGTTCTCAAATTACCCAACATTTCTCGCTTAGACCTCAGTAACAACAGTTTTTCAGGTCCATTACCTATTGAAATCTCTCAGATGACTTCTCTGAAGTTCTTAATCTTGGCCCATAATCAATTCACTGGAACTATTCCTCATGAGTTTGGAAATTTGGCTCAGCTTCAAGCACTTGATATTTCTTTCAACAATTTAACAGGGCCAATCCCATCAAGCCTAGGAAATTTGGGTTCTCTCTTATGGTTAATGCTTGCCAACAATTCATTGACCGAAGAAATCCCAAAAGAGCTAGGAAATTGCGCTAGCTTGCTGTGGTTAAACCTCGGAAACAATTATCTCTCTGGGAATTTCCCTCCTGAATTGACCAAAATTGGAAGAAACTCCATGGCCACATTTGAATTGAATCGTAATGATGTCAATGGAAATATCCCTGCTGGTTCTGTTGAATGTTCTGCAATGAAAAGATGGATTCCTGCAGATTACCCACCTTTCATCTTTGTGTATAGCATCCTCACAAGGAAAAATTGCATAAGCCTTTGGGACAGATTACTTAAAGGGTATGGAATTTTCCCAATTTGTTCATCTGGGTCATTTTTTCGATTGAAAGAGATTTCTGGGTATGTTCAGTTAAGTGGGAATAATCTCATCGGAGAAGTTCCTTCAGAAATTGGGAACATGCAAAATTTCAGCATGCTGCATTTAGGGTTGAACAAATTTTCTGGGGAAATCCCTGCAGTGATGGGAGATCTGCCACTTGTGGTGTTGAACATAACAAGAAACAATTTTTCAGGTGAGATTCCATGGGACATTGGAAACCTTAAATGTCTTAGGAATCTGGATTTTTCCTACAACAATTTCTCTGGGACATTCCCTACAAGCTTGAACAACTTGACAGAGCTCAGTAAATTCAACATCTCTTACAATCCCTTAATTTCTGGGACAATCCCACCAACAGGACAATTAGCCACATTTGATGAAGATTCGTATTTGGGAGACCCACATTTGACCCTACCCAGCTTCCTCGATAACGACCCAGACGACCCCAAAAAAAACACAAACGCTCATAGAGGCCACAAAATCAAAAACAGAAACCCCACGAAACTGTCAATGTTCTTGGCGTTTCTTGCTATGACACTTGCTCTGTTGGTATTCGGGCTAATCTCTTTCATAGTATGTTCATTAGCAAAAACACGTTCACATGACCCAGAAGGATACCTATTGGAAGACACAAAAAGTCAACAAGACTCCGACAATTCATCACCATGGTCGTCCGACCAAATTAAGGTTATCCACTTGAACAAGATCGCATTCACGCACGCCGACATACTCCAAGCCACCGGAAACTTCTCCGATAACAGAGTCATAGGAAAAGGCGGTTTTGGCACCGTGTACAGAGGAATATTCCCGGACGGAATAGAAGTCGCAGTGAAGAAGCTTCAAAGAGAAGGATTCGAAGGAGAAAGAGAGTTCAGAACAGAAATGGAAGTTCTGAGCGGAAACGGCTTCGGGTGGCCCCACCCGAATTTAGTGACCCTATACGGGTGGTGCCTAAACGGGTCGGATAAAATCCTGGTTTATGAATACATGGAAGGAGGAAGCTTGGAAGATTTTGTTACGGACAGAACAAGACTCACGTGGAAAAGAAGGTTAGAGATCGCCACTGATGTTGCTCGAGCTTTGGTTTATTTGCACCACGAATGTTTCCCGCCAATTGTTCACAGAGACGTGAAGGCTAGCAACGTGCTCTTGGATAAACATGGGAAGGCCAAAGTTACAGACTTTGGGCTAGCAAGAGTGGTGGAAAACGGAGTGAGTCACGTGACCACCATGGTCGCCGGCACAGTGGGCTACGTGGCACCGGAGTATGGTCAGACATGGAAGGCGACAACCAAAGGTGATGTGTACAGCTTTGGAGTGCTGGCTATGGAGTTAGCCACCGGAAGAAAGGCAGTGGACGGTGGTGAGGAGTGCTTGTTGGACTGGGCTCGACGGGTCACGGGCTATGGATATGGTCTGACCCGGCCCATGATACCAGTGTTGTTGATGGGCTCTGGGCTCGGAGAGGGGTCGGAGGATATGGGTGAGTTGTTACGGATTGGTATAAAGTGTACGGCGGAGGCACCGCAAGCTAGGCCCAACATGAAGGAGGTCTTGTCTATGCTGGTTAACATATTGTCCCCAAAAGGGGAGTGA 3291 0.4412 MSEQETQSWGFIFVCFLIFFSGKIVAQDFLDTERQILLQLRTYLNHQTRTDGGRYKLWNTTSSNPCQWPGISCRRPTGTTTSAAARVVGIDLSDSSIAGEIFKNFSQLAELTHLDLSTNTIIGEIPTDLSRCSNLVYLNLSHNLLEGEIDFTGLTRLETLDLSQNRLHGDIGSNFPAICDNLVTLNVSGNNFTGSIDHCFDQCSKLQYLDLSTNDISGGIWMGFARLKEFSVSENSLTGPLIEQAFPENCNLEVLDVSYNGFTGIAQKNVSKCKNLAILNLSSNKFSGDIPIELGSISSLQALYFANNTFSRSIPETLSNLTNLNFLDLSGNGFGGEIQDTLGKLKQVKFLLLHSNAYTGGLNSSGVLKLPNISRLDLSNNSFSGPLPIEISQMTSLKFLILAHNQFTGTIPHEFGNLAQLQALDISFNNLTGPIPSSLGNLGSLLWLMLANNSLTEEIPKELGNCASLLWLNLGNNYLSGNFPPELTKIGRNSMATFELNRNDVNGNIPAGSVECSAMKRWIPADYPPFIFVYSILTRKNCISLWDRLLKGYGIFPICSSGSFFRLKEISGYVQLSGNNLIGEVPSEIGNMQNFSMLHLGLNKFSGEIPAVMGDLPLVVLNITRNNFSGEIPWDIGNLKCLRNLDFSYNNFSGTFPTSLNNLTELSKFNISYNPLISGTIPPTGQLATFDEDSYLGDPHLTLPSFLDNDPDDPKKNTNAHRGHKIKNRNPTKLSMFLAFLAMTLALLVFGLISFIVCSLAKTRSHDPEGYLLEDTKSQQDSDNSSPWSSDQIKVIHLNKIAFTHADILQATGNFSDNRVIGKGGFGTVYRGIFPDGIEVAVKKLQREGFEGEREFRTEMEVLSGNGFGWPHPNLVTLYGWCLNGSDKILVYEYMEGGSLEDFVTDRTRLTWKRRLEIATDVARALVYLHHECFPPIVHRDVKASNVLLDKHGKAKVTDFGLARVVENGVSHVTTMVAGTVGYVAPEYGQTWKATTKGDVYSFGVLAMELATGRKAVDGGEECLLDWARRVTGYGYGLTRPMIPVLLMGSGLGEGSEDMGELLRIGIKCTAEAPQARPNMKEVLSMLVNILSPKGE 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2774 1096 Gene3D Phosphorylase Kinase; domain 1 776 894 - -
Acco04g2774 1096 SUPERFAMILY L domain-like 224 486 - -
Acco04g2774 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Acco04g2774 1096 Gene3D Ribonuclease Inhibitor 618 712 IPR032675 -
Acco04g2774 1096 Gene3D Ribonuclease Inhibitor 366 617 IPR032675 -
Acco04g2774 1096 FunFam Leucine-rich repeat receptor protein kinase MSP1 777 894 - -
Acco04g2774 1096 ProSiteProfiles Protein kinase domain profile. 815 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2774 1096 SMART LRR_typ_2 321 345 IPR003591 -
Acco04g2774 1096 SMART LRR_typ_2 154 181 IPR003591 -
Acco04g2774 1096 SMART LRR_typ_2 394 417 IPR003591 -
Acco04g2774 1096 SMART LRR_typ_2 418 441 IPR003591 -
Acco04g2774 1096 SMART LRR_typ_2 442 466 IPR003591 -
Acco04g2774 1096 SMART LRR_typ_2 108 132 IPR003591 -
Acco04g2774 1096 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Acco04g2774 1096 MobiDBLite consensus disorder prediction 706 727 - -
Acco04g2774 1096 Pfam Protein kinase domain 816 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2774 1096 ProSitePatterns Protein kinases ATP-binding region signature. 821 844 IPR017441 GO:0005524
Acco04g2774 1096 Pfam Leucine rich repeat 251 308 IPR001611 GO:0005515
Acco04g2774 1096 Pfam Leucine rich repeat 420 479 IPR001611 GO:0005515
Acco04g2774 1096 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Acco04g2774 1096 Gene3D Ribonuclease Inhibitor 176 365 IPR032675 -
Acco04g2774 1096 Gene3D Transferase(Phosphotransferase) domain 1 895 1095 - -
Acco04g2774 1096 FunFam Leucine-rich repeat receptor-like protein kinase 895 1096 - -
Acco04g2774 1096 SUPERFAMILY L domain-like 574 681 - -
Acco04g2774 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 507 - -
Acco04g2774 1096 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Acco04g2774 1096 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 293 1088 - -
Acco04g2774 1096 SMART serkin_6 815 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2774 1096 SUPERFAMILY L domain-like 55 310 - -
Acco04g2774 1096 SUPERFAMILY Protein kinase-like (PK-like) 789 1087 IPR011009 -
Acco04g2774 1096 CDD STKc_IRAK 821 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2774 Acco-ChrAcco04 44567635 44571216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2774 66 1090 Receptor kinase-like Gene Family AT5G07280 32.935 7.58e-145 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Acco04g2774 Pkinase 2.8e-45 CL0016