Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2771 ATGGGTTGTGTGAATGCGAAGCAGGCGGTGTCGGTGACGCCTGCAATTGACCACTCCGGTGTTTTTCGTGGCAATGTGGGTACGGGAAATTCGGGGAGGAGTTTAGGGGAGTCGGACAAGAACAAGAAGAGTGAGTCAGTGGGGCTGAGTAGAAGCGAGGTAGGTGAGTCGGGAAGGGCGAGTTCAAATGGAGGTTGTGATTCGTATAGTTTTAGACTGGGGAATCTGCAAAAGTATGTGGAAGGAGAGCAAGTAGCAGCCGGTTGGCCGGGTTGGCTAACCGCCGTCGCCGGGGAAGCCATTCAGGGCTGGGTGCCACTCCGAGCTGATGCGTTTGAGAAGCTTGAGAAGATCGGACAAGGAACATACAGCAGTGTTTTCCGAGCAAGAGAACTCGAGACGGGGAAGATAGTGGCTCTGAAGAAGGTACGGTTTGACAACTTTGAGCCCGAAAGCGTCAGGTTCATGGCTCGAGAAATAACGATTCTCCGAAGGCTTGATCATCCAAACATTATAAAATTGGAGGGCTTGATTACTTCCAAATTGTCATGTAGCATATATCTTGTATTCGAGTATATGGAACATGACATTACAGGGCTCTTATCTTCGCCTGATATCAAGTTTAGTGAATCGCAGATTAAATGCTACATTAAGCAGTTGTTATCTGGACTTGACCATTGTCATTCACGTGGTGTAATGCACCGTGACATCAAGGGATCTAATCTTCTAGTGAATAATGATGGGATACTAAAGATAGCTGATTTTGGACTGGCGAACTTCTCAAATCGTGGGCACAAACAGCCCCTCACTAGTCGTGTAGTTACGTTGTGGTACCGTCCTCCTGAACTTTTACTGGGTTCAACTGACTATGGTCCTTCTGTGGATCTTTGGAGCATTGGCTGCGTATTTGCTGAACTACTTGTCGGGAAGCCTATCCTTCAGGGGAGAACAGAGGTCGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCTCCACCTGAAGAATACTGGAAAAAGTCTAGACTCCCTCATGCAACATTGTTTAGGCCACAGCAGCCATATGGTAGTTGTCTCCGAGAGACCTTTAAAGATTTGCCTCCAACTAGTGTGAACTTGCTACAGACTCTTCTTTCTGTGGAACCATACAAACGTGGAACTGCCTCCTCTGCTCTCTCATCAGAGTATTTCAAAACAAAGCCATATGCTTGTGAACCATCAAGCCTGCCGGTATACCCACCTAGCAAGGAGATTGATGTGAAACAGCGGGAGGAGTCAAGGAGGAAGGGGTTTATTGGTGGAAGAGCACGTGGACCTGAAACAAGAAAGCCATCAAGAAAGCCATCAGGATTCAACAAATTAGTCCCAACAGAGGATTTGGCAAGTCAAACCCAGAAATTCCAAAAGGTAAATGGCAGGTCAGTCCACATCCTTAAAGAAGGGAGCACCAATGTAGGTAAGGAGGAACCAAAGCTGTCTAGTGATAAACCAGATGATGCTTCCCATACTAAGAATGCATCTCAAGGAGATATTCCCTTTTCTGGGCCGTTGCAAGTTTCGACATCAAGTGGCTTTGCATGGGCAAAAAGACGTCAAGATGACATTTCAATAAGATCCCACTGTCGATCTATTTCAAGGGGGCATATTGTCAATCCATTAGAGTCTTCTGTACCAAATTCAATGAATAACTTTGATTCTAGAAGCATGGAAAATAAGGATTGTCTGGCACGCTCCAACTCTCGGAGCCATGATCCACTTGAAATCCCTAAGCCTGCCATGCAAAACCAATGGAGCAAGTTTGATCGCCCAGATTCTTTTGATGCTTCTGACGAATACCACTCACAAGAGCTATCTATTGCACTTTATCATAGGGAGGATTCAATGTCCAAGAGAAGTAACCTGAGTTATCTGGATCATGGAGAGAAGGTTGAGTTTTCAGGACCCCTGCTATCTCAAATGCATACTGTTGATGAGCTCTTGGAAAAACATGAGCGCCACATCCGCCGAACAGTCCGAAGATCTTGGTTTCAAAGAGGTAATAAGCAAGGGAAGCAAGTATAA 2058 0.4577 MGCVNAKQAVSVTPAIDHSGVFRGNVGTGNSGRSLGESDKNKKSESVGLSRSEVGESGRASSNGGCDSYSFRLGNLQKYVEGEQVAAGWPGWLTAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREITILRRLDHPNIIKLEGLITSKLSCSIYLVFEYMEHDITGLLSSPDIKFSESQIKCYIKQLLSGLDHCHSRGVMHRDIKGSNLLVNNDGILKIADFGLANFSNRGHKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPEEYWKKSRLPHATLFRPQQPYGSCLRETFKDLPPTSVNLLQTLLSVEPYKRGTASSALSSEYFKTKPYACEPSSLPVYPPSKEIDVKQREESRRKGFIGGRARGPETRKPSRKPSGFNKLVPTEDLASQTQKFQKVNGRSVHILKEGSTNVGKEEPKLSSDKPDDASHTKNASQGDIPFSGPLQVSTSSGFAWAKRRQDDISIRSHCRSISRGHIVNPLESSVPNSMNNFDSRSMENKDCLARSNSRSHDPLEIPKPAMQNQWSKFDRPDSFDASDEYHSQELSIALYHREDSMSKRSNLSYLDHGEKVEFSGPLLSQMHTVDELLEKHERHIRRTVRRSWFQRGNKQGKQV 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2771 685 CDD STKc_CDK9_like 112 396 - -
Acco04g2771 685 Gene3D Phosphorylase Kinase; domain 1 99 194 - -
Acco04g2771 685 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2771 685 SMART serkin_6 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2771 685 MobiDBLite consensus disorder prediction 416 446 - -
Acco04g2771 685 FunFam probable serine/threonine-protein kinase At1g54610 99 194 - -
Acco04g2771 685 Pfam Protein kinase domain 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2771 685 MobiDBLite consensus disorder prediction 21 63 - -
Acco04g2771 685 FunFam probable serine/threonine-protein kinase At1g54610 195 435 - -
Acco04g2771 685 MobiDBLite consensus disorder prediction 455 470 - -
Acco04g2771 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Acco04g2771 685 Gene3D Transferase(Phosphotransferase) domain 1 195 433 - -
Acco04g2771 685 SUPERFAMILY Protein kinase-like (PK-like) 106 401 IPR011009 -
Acco04g2771 685 MobiDBLite consensus disorder prediction 410 517 - -
Acco04g2771 685 MobiDBLite consensus disorder prediction 503 517 - -
Acco04g2771 685 PANTHER CELL DIVISION PROTEIN KINASE 110 400 - -
Acco04g2771 685 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Acco04g2771 685 MobiDBLite consensus disorder prediction 481 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2771 Acco-ChrAcco04 44495626 44500644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2771 104 428 Core Cell Cycle Gene Families AT5G10270 50.147 1.56e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco04g2771 Pkinase 8.8e-70 CL0016