Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2760 ATGGAGATTGGAGGCTTTGATTTGAACAAAGTATATGCTAATGCTGGAAATCCTAGCAAGGGGACTGATGAGTTCATTGATAGAAGCAAGGTGAAAATATTATTGTGCGATAACGATACCAAGAGTTCGGAAGAGGTTTTAACGCTTCTTTCCGGATGTTCTTATCAAGTTACTTCAGTAAGCTCGCCAAGGCAGGCAATTGATGTACTGAATGCAGAGGCGCAAGATATTGATATCATACTTGCTGAAGTTGGCATGAAGATGTTGAAGTACATTGCACGAAAAAAAGATTTGCATCGAATTCCTGTTATAATGATGTCGGCACACGATGAAGTATCCATTGTTATGAAGTGTTTGAGACTTGGAGCAGCAGAGTATCTAATAAAGCCTTTACGCTCTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCACATGCTTGGTCTGACAGAGAAGAACATGAAGAACTGTAATTCTGATCTGGTAGCATCAGACCCTGGAGATGGTAATGGTAATACAGCCAGTACTGCCTTGTTCTCAGATGATACAGAAGACAAGTCCAACAGAAGCACTAATCCAGAGATAGGAATGTCAATCCAGCAACTAAATGAGTCTACAGCTGCTGCTGTTCCTGAGGAGCCTCCAGGTGCTCATGCCTCAGAGTATGGGCCTGACGTGCCTGGAATTAGTGATTGCCAGACAAGACACTGTTCTTCAGGACCAAAGACGAGTGGACTGAGGATTGGGGAGTCATCGGCGTTCTTTGGTTATGTTAAAACAACCATGCAAAAGAGCAACTTACAAGGGATTCCTCAAGTTCAGAATAATGCTGCTACGCAACTGAGGATGGAAGACATGCATCAAACTTGTCCCTATGGGGTTCATAACCTTAAAACACATGAAAATGGAGAGCCAAGTAAGAGATCTAATAAAGATGATTTACACAGCAGCATTAGTAATCCTGATTCTTTCTCCACTGACAATTCTTCTGCTTCACCTGCATCCATGGGAAGTCTAAATCAAAAGAACTTCAATCAAGAAGTCACCCATGTTAGAAATGGAACTCATATTTCTGAGACTCAATTGCCTGGTACTCCTTACCAACATCCTCATTTATATTATATTTCAGGGTTCTTCAATCACCTTCTGATGCCATCCTCAGCGCCATTGTATCCTAAGAATCATCAGGACCCACAGAATCATGCTAGTGCAACGATGATTGCACGGTACAATGACATTTCCCACCATCCTTCTGATGCGAATGGGATGACTTACTTTCCATATCACCCAATGACTGTATGCTTACAACCTGGTCAGACGTCCTCAGCTCATTCACGGCCATCATTTGGAAGTTCAAGTTCATCCAAAGCAAAACTAAATATAGTTGATAGAAGAGCAGAAGCATTGATGAAGTTTAGAAAGAAAAGGAAAGAACGATGCTTTGATAAGAAAATTAGGTACGTCAATCGAAAGCTGCTTGCTGAAAGGCGACCTCGCGTGAGGGGACAGTTTGTGAAAAAGTTGAATGGAGTCAATGTTCATCTCAATGGACAACCAGATTCCATTGAATATGATGAAAAAGAGCAGGACGACGACAAAAAAGAGAACAATATGACAGATTCATCTCCTGAAGATGCTTGA 1650 0.4152 MEIGGFDLNKVYANAGNPSKGTDEFIDRSKVKILLCDNDTKSSEEVLTLLSGCSYQVTSVSSPRQAIDVLNAEAQDIDIILAEVGMKMLKYIARKKDLHRIPVIMMSAHDEVSIVMKCLRLGAAEYLIKPLRSNELLNLWTHMWRRRHMLGLTEKNMKNCNSDLVASDPGDGNGNTASTALFSDDTEDKSNRSTNPEIGMSIQQLNESTAAAVPEEPPGAHASEYGPDVPGISDCQTRHCSSGPKTSGLRIGESSAFFGYVKTTMQKSNLQGIPQVQNNAATQLRMEDMHQTCPYGVHNLKTHENGEPSKRSNKDDLHSSISNPDSFSTDNSSASPASMGSLNQKNFNQEVTHVRNGTHISETQLPGTPYQHPHLYYISGFFNHLLMPSSAPLYPKNHQDPQNHASATMIARYNDISHHPSDANGMTYFPYHPMTVCLQPGQTSSAHSRPSFGSSSSSKAKLNIVDRRAEALMKFRKKRKERCFDKKIRYVNRKLLAERRPRVRGQFVKKLNGVNVHLNGQPDSIEYDEKEQDDDKKENNMTDSSPEDA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2760 549 ProSiteProfiles Response regulatory domain profile. 32 144 IPR001789 GO:0000160
Acco04g2760 549 Gene3D - 31 221 - -
Acco04g2760 549 MobiDBLite consensus disorder prediction 161 248 - -
Acco04g2760 549 MobiDBLite consensus disorder prediction 161 184 - -
Acco04g2760 549 Pfam Response regulator receiver domain 33 138 IPR001789 GO:0000160
Acco04g2760 549 MobiDBLite consensus disorder prediction 296 342 - -
Acco04g2760 549 MobiDBLite consensus disorder prediction 523 549 - -
Acco04g2760 549 MobiDBLite consensus disorder prediction 319 342 - -
Acco04g2760 549 MobiDBLite consensus disorder prediction 440 459 - -
Acco04g2760 549 SUPERFAMILY CheY-like 29 150 IPR011006 -
Acco04g2760 549 ProSiteProfiles CCT domain profile. 468 510 IPR010402 GO:0005515
Acco04g2760 549 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 222 IPR045279 GO:0009736
Acco04g2760 549 MobiDBLite consensus disorder prediction 193 210 - -
Acco04g2760 549 SMART REC_2 31 140 IPR001789 GO:0000160
Acco04g2760 549 MobiDBLite consensus disorder prediction 303 318 - -
Acco04g2760 549 MobiDBLite consensus disorder prediction 518 549 - -
Acco04g2760 549 Pfam CCT motif 468 510 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2760 Acco-ChrAcco04 44422719 44426421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2760 20 548 Response Regulator Gene Family AT5G61380 43.910 1.73e-144 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco04g2760 Response_reg 8e-13 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2760 04 44422719 44426421 Acco04g2760 04 44422719 44426421 ECH