Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2758 ATGGAAGCTGAAGAGATCGAAAGAGTTGGGAGGTTCCATTTTGTATCGAAATTGATATTATCAGCCATTTCTGGGGCTCTCACGGGATGCTTTGCCATTGCTGGAGCCATCACAGGAGCCATAGCTGGTGCACTAGCGAGTAGGGCTTCTGAGAGTGGTTTTCTCCGTGGAGCTACATTGGGGGCTATTGCTGGGGCTATAATATCTGTTGAGGTGTTAGAAGCTTCTCGTGCCTACTGGTGTTTAGAGCAAACTGGTTCAAGGAGCTCATCATCCATGGCAGATTTCATAGAGCAACTTGTTCGTGGGAGGCTTGTACAGGAACAATTTACACCAGCTATACTAACTGCTTACAATTGGCAGGTTGGGGCTGATAGTACAGGCTATGATGCGATTCCTGAGGTTCATAGCTTAGTTTCGCCTAGAGGATTGTCTGGGGATTCGTTGAAGAAGTTACCACACCATGTTATCTTAAAGGACACGAATACAGAGAATCTCTGCTGCACAATATGTTTGCAGGACATAGAAGTAGGAGAAATCGCGAGGAGCTTACCCCGATGTGGCCATTCATTTCACCTGAACTGTGTGGACCAATGGCTTGTCAAGAATGATTCATGTCCTGTCTGCAGACAATATGTATAG 642 0.4611 MEAEEIERVGRFHFVSKLILSAISGALTGCFAIAGAITGAIAGALASRASESGFLRGATLGAIAGAIISVEVLEASRAYWCLEQTGSRSSSSMADFIEQLVRGRLVQEQFTPAILTAYNWQVGADSTGYDAIPEVHSLVSPRGLSGDSLKKLPHHVILKDTNTENLCCTICLQDIEVGEIARSLPRCGHSFHLNCVDQWLVKNDSCPVCRQYV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2758 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 213 IPR013083 -
Acco04g2758 213 Pfam Ring finger domain 168 210 IPR001841 -
Acco04g2758 213 SUPERFAMILY RING/U-box 149 213 - -
Acco04g2758 213 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Acco04g2758 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 4 212 IPR044523 -
Acco04g2758 213 SMART ring_2 168 209 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2758 Acco-ChrAcco04 44392395 44394521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2758 1 213 C3H Transcription Factor Family AT1G74410 55.607 1.78e-74 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2758 04 44392395 44394521 Acco04g2758 04 44392395 44394521 ECH