Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2754 ATGGAAAGCGTCTGTGTTATGTATAACAAGGATGTAGATCGCATGAATTTGCCGCCTGGTTTTCGGTTTCACCCAACAGATGAAGAGCTAATCACTCATTATCTGTTCAAAAAGGTCACTCTCACGAACTTCTCTGCTATAGCCATTGGAGAAGTGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCCCAGAAAGCAAAAATGGGAGAGAAAGAGTGGTTTTTTTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACGAACAGAGCAACAGAAGCAGGGTACTGGAAGGCCACGGGTAAAGACAGAGAGATTTACAGAGGAAAATCTCTGGTAGGGATGAAGAAAACTTTGGTTTTTTACAGAGGAAGAGCACCAAAGGGAGAAAAAACCGATTGGGTCATGCATGAATTCAGATTGGATGGTAAATTCTCTGTTCAAAACCTCCCCAAAACTGCAAAGAAAGAGTGGGTTATTTGCAGGTTGTTTTGGAAAAACCAAGGTTCTAAGAAAACCCATATGAGATGTGAAGTTGAATCCACTGAAAATGGATTGGGCTCTTCAGTTTTATTACCTCCTCTGGCGGATTCTTCTCCTTTTATTGGTAAAACAGAGCCCAACGTAACAGAGTCAGCGTACGTGTCCTGCTTCTCCATTGCAATTGATGATCAAAGAAACCAAGAAGGAATCTTTGATTCCTTAGGAAATTCCCTTTTGATGATTCCTTCAAATTATTCAAAAATCCTGCCCAGAATCCCTCTGTATTCTGCTCAACCTCCTTATCAAGCTCATGGAAATTTCTGTAGGCAGAACCAGAAGAACCTGCTTGAGGCTTTTCTCGAAAACCATGGATCAAACATGAGGAGTGGTTTCAATTCCAAGGGAGAACAATTTGTGAGTGTTTCCCAAGAAACAAGTTTCACCACTGATATGAATCCTGAAATTTCTTCTGTGATGGTATCAAGTTTTGGTGTTGGTAGGAGGGTTTTTGAGAATAATAATCAGCAAAATCTCTCTGCTTCCTCTGCTTTTCCAATGGACCGTGATGGCTTGTGGAATTACTAA 1071 0.4127 MESVCVMYNKDVDRMNLPPGFRFHPTDEELITHYLFKKVTLTNFSAIAIGEVDLNRSEPWDLPQKAKMGEKEWFFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYRGRAPKGEKTDWVMHEFRLDGKFSVQNLPKTAKKEWVICRLFWKNQGSKKTHMRCEVESTENGLGSSVLLPPLADSSPFIGKTEPNVTESAYVSCFSIAIDDQRNQEGIFDSLGNSLLMIPSNYSKILPRIPLYSAQPPYQAHGNFCRQNQKNLLEAFLENHGSNMRSGFNSKGEQFVSVSQETSFTTDMNPEISSVMVSSFGVGRRVFENNNQQNLSASSAFPMDRDGLWNY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2754 356 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Acco04g2754 356 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Acco04g2754 356 FunFam NAC domain-containing protein 100-like 26 171 - -
Acco04g2754 356 SUPERFAMILY NAC domain 6 167 IPR036093 GO:0003677|GO:0006355
Acco04g2754 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 272 - -
Acco04g2754 356 Gene3D NAC domain 26 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2754 Acco-ChrAcco04 44323093 44324351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2754 15 356 NAC Transcription Factor Family AT5G07680 55.523 1.10e-117 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g2754 NAM 1.3e-38 No_clan