Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2753 ATGGAGAGCATTTCTGTGCTGTACAACAAGGAAGAAGGGGAAGCGAAAATGGGAGAGGATGAGTGGTATTTTTTCTGCCTGAGAGACAGAAAATACCAAACTGGTCTGAGAACCAACAGAGCCACTGAAGCTGGGTACTGGAAATCCACAGGGAAGGATGTGGAGATTTACAGAGGGCAATGCCTGATAGGGAAAAGGAAAACTCCGGTTTTCTACCTGGGAAGAGCACCAACTGGAGAAAAAACGAACTGGGTCATGCGTGAATACAGACTAGATGGAAACTTCTCTGTCCACAACTCCTCTAGGCCTGCAAAGGTCATTACATGGGAACCTACGATAAGTACTGATTCGGCACATGTGCCTTGCTTCTCCTCTCTGCTATGGGATGATGAAAACGACCAAGCAGGGAATTTTAATTCTGCAGAAAACTCCCTTTTGGGGATTTGCTCAAATCCTCAAGAATTTTTGCCAACAATGCCTCTTGATGATTGGTCGTATTCTGCTGAACCCATTATTGAAGCTCCGATGAATCTGCCATTATTGTCAGATTCTGAATTGAGTGTGCAGGAACAGAACTTCCTTGATGGTGTTTTTGAGAACCAAGGTTTTATGGCAGAGGCAGAGCAAATGCTGAGTGTTTCGCATGAAACGAATCTGACCAACACTGACTTGAATCCAGAGATTTCTTCTGTGATGTCAAGTTTTGGTAATCAGCAGAACCCATCTTCTTCTTCTGGAGCATCATTGGACCATGATAACTTCTGGAGCTTAGAGATGAAGCAGCCATATGCTGGCAACACTAAGAAGATGAAGAAGCTAAAGCTAGCAAATGTTGATGATGAGTGGGGTGACGATAGCGCTTCAAAGAACCCTAAAGCCTCTGTGGACATGAGGTCGTTAACGATGGCGATGATGCTAGTGATGGCAGCTTATGTGAGCAAGCAATAG 948 0.4462 MESISVLYNKEEGEAKMGEDEWYFFCLRDRKYQTGLRTNRATEAGYWKSTGKDVEIYRGQCLIGKRKTPVFYLGRAPTGEKTNWVMREYRLDGNFSVHNSSRPAKVITWEPTISTDSAHVPCFSSLLWDDENDQAGNFNSAENSLLGICSNPQEFLPTMPLDDWSYSAEPIIEAPMNLPLLSDSELSVQEQNFLDGVFENQGFMAEAEQMLSVSHETNLTNTDLNPEISSVMSSFGNQQNPSSSSGASLDHDNFWSLEMKQPYAGNTKKMKKLKLANVDDEWGDDSASKNPKASVDMRSLTMAMMLVMAAYVSKQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2753 315 ProSiteProfiles NAC domain profile. 1 109 IPR003441 GO:0003677|GO:0006355
Acco04g2753 315 Gene3D NAC domain 7 114 IPR036093 GO:0003677|GO:0006355
Acco04g2753 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 214 - -
Acco04g2753 315 Pfam No apical meristem (NAM) protein 14 91 IPR003441 GO:0003677|GO:0006355
Acco04g2753 315 SUPERFAMILY NAC domain 15 98 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2753 Acco-ChrAcco04 44312612 44314440 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2753 15 255 NAC Transcription Factor Family AT5G61430 39.931 1.86e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g2753 NAM 1.6e-15 No_clan