Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2748 ATGGAGAACACTTCTGTGCTATCCAACGAGGCAGAAGGTCAGATTAATTCGTCTCCTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTACTCACTTGTTATCTGTACCCGAAGTCCAGAAATGACAACTTCTCTGCTAGACCCATTGCAGAAGTAGATATACAAAAGTTTCAGCCTTGGGATTTGCCGAGGGAAGCGAAGATGGGAGATTATAAGTGAGGACTTCAGGGGGCAAGAAAACCCATATTTCTGATATCTGATATAACGAGGTTTGAATCCATTGGAAATGGATTGGGTTCTTCTTCAGTGTCACTTTCACCACCTGTCGTCGCAGGTCATTACATGGGCTCAATGGAACCTACGTCGAGTACTGATTCGGCACCTTTGCCCTACCTCTCCTCTCTGTTACGGGATGATGAAAACGACCAAGCAGGGATTTTTAATCCTGCAGAAAACTCCCTTTTGGGGATTTTCTCAAATCCTCAAGAACTTTTGCCAACAATGCCTCTTCATGATTGGTCGTATTCTGCTGAACCCAATATTGAAGCTCCGATGAATCTGCCATTATTGTCAGATCCTGCGTTGATCGGGCAGCAACAGAACTTCGTTGATGGTGTTTTTTATTACGATGGTTTTATGGCAGAGGCAGAGCAAATGCTGAGTGTTTCGCATGAAACGAATCAGACCAACACTGACTTGAAACCAGAGATTTTTTCTGCCAGAGACACTAAAGACAGTGGAGGCCTTTGGGTTAGTGAGAAGAATTGTGCTAAGCTGAACCAGATTGGAATAACCAGTACGGTCCACACCATCTGTGAATGTGAATCCAAAATCTATTGTCGTGCTCTGGTTCAGTGGCTCTATATAATGGGTATGAAGAAACCCTAA 888 0.4414 MENTSVLSNEAEGQINSSPGFRFHPTDEELLTCYLYPKSRNDNFSARPIAEVDIQKFQPWDLPREAKMGDYKXGLQGARKPIFLISDITRFESIGNGLGSSSVSLSPPVVAGHYMGSMEPTSSTDSAPLPYLSSLLRDDENDQAGIFNPAENSLLGIFSNPQELLPTMPLHDWSYSAEPNIEAPMNLPLLSDPALIGQQQNFVDGVFYYDGFMAEAEQMLSVSHETNQTNTDLKPEIFSARDTKDSGGLWVSEKNCAKLNQIGITSTVHTICECESKIYCRALVQWLYIMGMKKP 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2748 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 70 - -
Acco04g2748 295 MobiDBLite consensus disorder prediction 1 21 - -
Acco04g2748 295 Pfam No apical meristem (NAM) protein 19 69 IPR003441 GO:0003677|GO:0006355
Acco04g2748 295 Gene3D NAC domain 26 92 IPR036093 GO:0003677|GO:0006355
Acco04g2748 295 SUPERFAMILY NAC domain 7 71 IPR036093 GO:0003677|GO:0006355
Acco04g2748 295 ProSiteProfiles NAC domain profile. 17 209 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2748 Acco-ChrAcco04 44277768 44280829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2748 10 70 NAC Transcription Factor Family AT5G39610 62.295 7.10e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g2748 NAM 1.2e-12 No_clan