Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2718 ATGGGATCAGAAGCTCCTGCTCTGGCAGCTGAGGAAGTCAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCCGGTAAAAAGAACAAAGGGAAAGTCCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGCGAGCATTTGAATGATCTCTTTCTTGATCTTGCCAATGCTCTTGAACTAGGTCAGCAAAACAATGGAAAGGCTTCCATATTGTCTGAAGCCACCAAGCTGCTTAGAGACCTGCTTGATCAGATTGAGACCCTTAAGAAGGAGAATGTGTCTCTGCTGTCTGAATCACATTATGTTACCACGGAGAAGAATGAGCTGGAGGAGGAAAATTCTGTTCTAGAGACACAAATCGAGAAACTCCATGGCGAGATAGAAGCGCGAGTAGCACAATCTAAACCCGACCTAAATGCACCTCCTCCAATGGAGCTCGGGCCACCTGAGCAAACGACAATTTTCCCTAGAGAGTGTCTCCAATTGCCTTCTGTTGATCCTACATTGCAGCAAGGACCTGCATTATTAGTTGTCCCTTTTGGCCCTCATCTTCAACCTTCTTTTCCCACCTCAAACTCCGTTGTAAGTAAACCTCATGCCAGGTATCCCACCCCTGCAGATTCATGGCCGTCGCAGCTGCTCGGAGAGCAGCCAACATCAAGCTAA 678 0.4646 MGSEAPALAAEEVNMLEGTSKTSSCPGKKNKGKVPKRIHKAEREKMKREHLNDLFLDLANALELGQQNNGKASILSEATKLLRDLLDQIETLKKENVSLLSESHYVTTEKNELEEENSVLETQIEKLHGEIEARVAQSKPDLNAPPPMELGPPEQTTIFPRECLQLPSVDPTLQQGPALLVVPFGPHLQPSFPTSNSVVSKPHARYPTPADSWPSQLLGEQPTSS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2718 225 PANTHER TRANSCRIPTION FACTOR BHLH47 1 224 - -
Acco04g2718 225 Gene3D - 28 102 IPR036638 GO:0046983
Acco04g2718 225 MobiDBLite consensus disorder prediction 191 225 - -
Acco04g2718 225 Coils Coil 110 130 - -
Acco04g2718 225 MobiDBLite consensus disorder prediction 15 37 - -
Acco04g2718 225 Pfam Helix-loop-helix DNA-binding domain 36 85 IPR011598 GO:0046983
Acco04g2718 225 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 34 101 IPR036638 GO:0046983
Acco04g2718 225 Coils Coil 75 102 - -
Acco04g2718 225 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 85 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2718 1 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 48.980 1.09e-63 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2718 04 43971401 43972858 Acco04g2718 04 43971401 43972858 ECH