Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2714 ATGTCTAGCAGAAGAACTTCATCAAAACTCTCAGAGAATGAGATTAATGAGATTGTTTCCAGGTTACAGGCAGTACTGCCACGGCTGAACCAAAGAACCAACTCAAGGGCATCAGTATCGAAGATAGTGAAAGAAGCATGCAGCCACGTGAAGAAGCTTCAGAAAGAGGTGGATGAGCTTAGTGAGAAAGTAGCAGGCCTCATGGATTCTGTGGATATCACTCAAATTGATGAACAAACCCTTCGAAGTATTCTCCAGTAA 261 0.4291 MSSRRTSSKLSENEINEIVSRLQAVLPRLNQRTNSRASVSKIVKEACSHVKKLQKEVDELSEKVAGLMDSVDITQIDEQTLRSILQ 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2714 86 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 69 IPR036638 GO:0046983
Acco04g2714 86 Coils Coil 43 70 - -
Acco04g2714 86 PANTHER DNA BINDING PROTEIN 1 86 IPR044172 -
Acco04g2714 86 Gene3D - 3 83 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2714 Acco-ChrAcco04 43953526 43954171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2714 7 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 37.500 1.49e-15 63.9