Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2710 ATGATGCGGGAGAATAATCAAATTCTTACAAATAATCAATCTGGACATTCTCATCACAGAGGCCGAACCGTTTTCTATAGAAATTACCTTCCTCTTCCTCTTATGGGAAATTGCTTTCGACACCGTCCCAAGCCTGACGATAATAAAATCCCCTCTCACCCTATTTCCGGTTCTACACAAGTTTCTGTCAAAAGCACCCATCCTTATGCTCATTCGAGTCCAGTGAAAGGAGCCAAACCTCAGACACTCCCTACTCCAAGATTGGAAGGTGTCTTACTATCCTCTCTGCATCTGAAAGCCTTCACTTTCAATGAACTTAACGATATTACTAGAAACTTTTGTCCTGATAATCTACTGGGAGAAGGTGGATTTGGTAAAGTTTACAAGGCGTGGATTGATGAACAGTCTTTTGGACCTGCGAGTCCTGAATCTGGAATGGCTATAGCTGTTAAGAAGCTTAAGTGTAATGGTTTTCAAGGACACAAGGAGTGGCTGTCTGAACTCAATTATCTTGGTCAACTTCATCACCCAAATCTTGTTAAACTTCTTGGGTTCTGCATCGATGGGGATAGCCGGCTTCTGGTATACGAGTACATGCCAAAAGGCAGCTTGGAGACTCATCTATTTAGCAGGGGTGCACCGCCACTTCCTTGGGCAACAAGGATCAAAGTTGCTATTGGTGCTGCTCGAGGCCTCACCTTCCTCCATGACTCCGACCAACAAGTTATCTACCGTGACTTCAAGGCTTCTAATATCTTATTAGATTCGGAGTTTAATGCAAAACTCTCAGACTTTGGTTTTGCCAAAGCAGGGCCCACCGGGGATCGTACTCATGTTTCCACTCAAGTCCTTGGTACTCATGGCTATGCTGCTCCTGAATATATTCTCACAGGTTGGTTGACTGCAAGGTGTGATGTTTATAGCTTTGGGGTTGTGCTATTGGAACTACTCTCAGGACGCCGTGCCCTTGACCGAACAAAATCTGGAGTTGAACAGAATTTGGTAGATTGGGCAAGACCATATTTGGGTGATAGGAGGAAGTTATTCAGGATAATGGACACCAAGTTAGAAGGGCAGTATCCACAGAAGGCAGCTTATACAGCAGCAATTCTTGCTCTGCAGTGCATCGGTGAGGCCAAAATCAGACCCCAAATGTCTGAAGTTCTGACTGCTCTTGAACAGCTTCAACATGCCAAAACCTCAGCTAGTTCATCATCAAGATCCAGAGCAGAGAGTAGTAGCCCCTCCTTAAGCCCCGAGCGAGGTCATACAGACACATCATCATTGAGACAAAATCATCGTTCAACAGAGAAAGGTTTCATCTCCAGTCAGTTAAGTGAGAGCATTGTAAGATCCCCTGTTAAATCTGAGCCCAAAGTACAGTGTGACCAGATTGGAAATCCTCATCATGTGGATACCATCAATGCATAG 1431 0.4458 MMRENNQILTNNQSGHSHHRGRTVFYRNYLPLPLMGNCFRHRPKPDDNKIPSHPISGSTQVSVKSTHPYAHSSPVKGAKPQTLPTPRLEGVLLSSLHLKAFTFNELNDITRNFCPDNLLGEGGFGKVYKAWIDEQSFGPASPESGMAIAVKKLKCNGFQGHKEWLSELNYLGQLHHPNLVKLLGFCIDGDSRLLVYEYMPKGSLETHLFSRGAPPLPWATRIKVAIGAARGLTFLHDSDQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDRTHVSTQVLGTHGYAAPEYILTGWLTARCDVYSFGVVLLELLSGRRALDRTKSGVEQNLVDWARPYLGDRRKLFRIMDTKLEGQYPQKAAYTAAILALQCIGEAKIRPQMSEVLTALEQLQHAKTSASSSSRSRAESSSPSLSPERGHTDTSSLRQNHRSTEKGFISSQLSESIVRSPVKSEPKVQCDQIGNPHHVDTINA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2710 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Acco04g2710 476 MobiDBLite consensus disorder prediction 399 425 - -
Acco04g2710 476 MobiDBLite consensus disorder prediction 1 20 - -
Acco04g2710 476 FunFam Serine/threonine-protein kinase BIK1 81 198 - -
Acco04g2710 476 Pfam Protein tyrosine and serine/threonine kinase 117 323 IPR001245 GO:0004672|GO:0006468
Acco04g2710 476 MobiDBLite consensus disorder prediction 52 69 - -
Acco04g2710 476 MobiDBLite consensus disorder prediction 399 476 - -
Acco04g2710 476 FunFam Serine/threonine-protein kinase PBS1 199 411 - -
Acco04g2710 476 ProSitePatterns Protein kinases ATP-binding region signature. 119 152 IPR017441 GO:0005524
Acco04g2710 476 Gene3D Phosphorylase Kinase; domain 1 94 198 - -
Acco04g2710 476 ProSiteProfiles Protein kinase domain profile. 113 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2710 476 MobiDBLite consensus disorder prediction 1 19 - -
Acco04g2710 476 CDD STKc_IRAK 119 395 - -
Acco04g2710 476 PANTHER OS01G0588500 PROTEIN-RELATED 71 396 - -
Acco04g2710 476 MobiDBLite consensus disorder prediction 433 451 - -
Acco04g2710 476 MobiDBLite consensus disorder prediction 40 83 - -
Acco04g2710 476 Gene3D Transferase(Phosphotransferase) domain 1 199 416 - -
Acco04g2710 476 SUPERFAMILY Protein kinase-like (PK-like) 88 392 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2710 Acco-ChrAcco04 43906839 43909697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2710 92 392 Glycoside Hydrolase AT3G07070 52.459 2.56e-105 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco04g2710 PK_Tyr_Ser-Thr 1.2e-42 CL0016