Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2708 ATGCTGCAGAGCTTTCTCCAACGGGTCATTAATAGTGAATTGGATAAGCCAGAAAACAAGTGTGGTTGCATTTGTACTAAGAGAGATGGCGATAAGTGTCTGGAGGAAACATGTGGGATTCAATACTCAGACGTAGCTCAAGTTGCAGCTTGTGCAATTCCTACCCCTCCAGAATGGCCTCCATTGATACAAGTGCCTTCTCCCGAATATCGAGCCGTGCAAACCGATATTATTCCCTTCTCAGATTTGCCAAATGATTCTTGCAGGAGGACGGGCTTGTGCCCTGTAACTTTTCTTTACACCGGCAATAATCAGTCCTTTGGAGAAAATCTTCCCATTTATTATCTGCAAACTCAGTGCACTCAGAACTCTTCGTTCTCTGTTCCAATTAACATTTCAACCAATACCATCCAGCAAGATATGATCAAGGTGCAAACAGGAAGTTTAGAATCTTTATTCTTAATTTTTGGCTCTAAACAAACATCTGCCTGGAGTGTGCTGATGACATGTGCTCAAGGTTTACATTTATGGCGAAATAATCCTTCTGAGGTCAACAATGAGCTATTTAAAGGCTATCGAAAAGGGAACCCAGAGAGACAGATCAATGAGATAGTTGCAGCCTATGATTTTCTAAATTCAAGTAAAAATAGCTTCAATGTCATCACATGGTACAACTCAACCTATAAGAAGGACACCGGTTTACAGCAAATTGCATTGGCACGAGTTCCTCGTTTAGTAAATTTGGGTTCGGGTACTGAGATGTTATTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCCATTGAGAATTGACGTGGCTTCTATTCTGGGTCCCCTCTTCTTTACTTGGGTCTTCCTGCAACTTTTCCCTGTATTTTTGACATCACTGCCGACTTCATTTACAGGATTGAAATTCTTTACATTGAATGACTACAGCGTCCAAATTGTTTTTTATTTCGTCTTCATAAACTTGCAAATTTCACTCGCATTTCTTGTGGCGGCCATGTTTTCAAATGTTAAGACAGCAACAGTGATTGCATATATTGGTGTCTTTGCAACTGGGCTTTTAGGTGGCTATCTTTTCAACTTTTTTGTTGAAGATCAATCATTCCCAAATTTGTTTGTCATCTTTATGTGTCATGTCTGTGTTGTAAAGTCTAAGCTTTCTGGCCTATCATTGCCTGCTGTGTCTTCAGGAGGGTGGATAGTTGTTTTAGAGTTGTATCCTGGGTTTGCGTTATATCGTGGACTCTATGAGTTTGCATCATATGCCTTCGAAGCAAATGCTACAGGGAACGATGGGATGCGATGGAAAAATCTGAATGACAGTATTGATCAAGTATTGGGAAGTCGCAAAAGTCCTCTCTTTCTCTTGAAAAGATTTCATAAAAAGCCTACGTCTTCATTCCAGAAGCCTAGTATCCAAAGGCAGGGATCAAAAGTTTTTGTTCAGATGGAGAAACCTGATGTCAGTCAGGAGAGGGAAAGGGTTGAGCAGCTCCTACTTGAACCAACCATGGATCATGCAATTGTTTGTGACAACTTAAAAAAGGTGTATCCAGGGAGGGACGGAAACCCAGAGAAATATGCAGTGAAAGGTTTATCTCTTGCTTTGCCTCATGGGGAATGCTTTGGTATGCTTGGCCCCAATGGTGCGGGGAAGACCTCATTTATCAGTATGATGATTGGTCTCACGAAGCCAACCTTTGGTGCAGCATTTGTTCAAGGCATGGACATAAGAACTCAAATGGATGAAATATATACCAGCATGGGCGTATGTCCACAGCATGACTTGCTGTGGGAAACTCTAACCGAAAGAGAACACCTGCTCTTCTATGGCAGACTTAAAAATCTTAGAGGCTCAGTCTTAACACAAGCTGTGGAAGAATCTCTGAAAAGTGTGAACCTTTTTCATGGGGGAGTTGCTGATAAAAAAGCTGGAAAGTACAGTGGAGGAATGAAGAGAAGGCTCAGTGTTGCAATTTCATTGATTGGAGATCCCAAAGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCATCAAGAAACAATTTATGGAATGTTGTCAAGCGCGCAAAGCAGAATCGGGCAATCATACTGACCAGTATATTCCTTCTCCCTATGCTTCTTGGAACACAAGTGATAGTGATTTCTTTCTCTTACACATTTATATTGCATGATTTCATTTCAGCACATTCCATGGAAGAAGCAGAGGTCTTATGTGACCGAATAGGTATATTCGTAGATGGAAGCTGGCAGTGCATAGGAAATCCGAAAGAGCTAAAAGCAAGATATGGAGGAAAGTATGTGTTCACAATGACAACATCTGTAGAGCATGAGAGTGAAGTGGAGAATATGGTGCACAAGCTGTCTCCAAATGCTACCATGACATACCATATCTCCGGAACTCAGAAATTTGAGCTGCCAAAACAAGTCAGAATAGCTGATTTCTTCCGAGCTATCGGCATCGCAAAGAGAAACTTCACTGTGTTTGCTTGGGGTTTAACAGACACCACAATGGAAGATGTCTTCATTAAGGTTTCACGTGAGGCTCAGGAATTCAACTCTTTGTCGTAA 2586 0.4134 MLQSFLQRVINSELDKPENKCGCICTKRDGDKCLEETCGIQYSDVAQVAACAIPTPPEWPPLIQVPSPEYRAVQTDIIPFSDLPNDSCRRTGLCPVTFLYTGNNQSFGENLPIYYLQTQCTQNSSFSVPINISTNTIQQDMIKVQTGSLESLFLIFGSKQTSAWSVLMTCAQGLHLWRNNPSEVNNELFKGYRKGNPERQINEIVAAYDFLNSSKNSFNVITWYNSTYKKDTGLQQIALARVPRLVNLGSGTEMLFEFVKEMPKPETPLRIDVASILGPLFFTWVFLQLFPVFLTSLPTSFTGLKFFTLNDYSVQIVFYFVFINLQISLAFLVAAMFSNVKTATVIAYIGVFATGLLGGYLFNFFVEDQSFPNLFVIFMCHVCVVKSKLSGLSLPAVSSGGWIVVLELYPGFALYRGLYEFASYAFEANATGNDGMRWKNLNDSIDQVLGSRKSPLFLLKRFHKKPTSSFQKPSIQRQGSKVFVQMEKPDVSQERERVEQLLLEPTMDHAIVCDNLKKVYPGRDGNPEKYAVKGLSLALPHGECFGMLGPNGAGKTSFISMMIGLTKPTFGAAFVQGMDIRTQMDEIYTSMGVCPQHDLLWETLTEREHLLFYGRLKNLRGSVLTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQNRAIILTSIFLLPMLLGTQVIVISFSYTFILHDFISAHSMEEAEVLCDRIGIFVDGSWQCIGNPKELKARYGGKYVFTMTTSVEHESEVENMVHKLSPNATMTYHISGTQKFELPKQVRIADFFRAIGIAKRNFTVFAWGLTDTTMEDVFIKVSREAQEFNSLS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2708 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 720 IPR027417 -
Acco04g2708 861 Pfam ABC transporter 533 677 IPR003439 GO:0005524
Acco04g2708 861 ProSitePatterns ABC transporters family signature. 650 664 IPR017871 GO:0005524|GO:0016887
Acco04g2708 861 CDD ABC_subfamily_A 515 765 - -
Acco04g2708 861 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 288 447 IPR026082 GO:0016020|GO:0055085|GO:0140359
Acco04g2708 861 Gene3D - 503 804 IPR027417 -
Acco04g2708 861 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 511 777 IPR003439 GO:0005524
Acco04g2708 861 SMART AAA_5 541 725 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2708 Acco-ChrAcco04 43889127 43897678 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2708 520 705 Calmodulin-binding Proteins AT2G36910 24.742 3.60e-12 68.6