LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco04g2707	ATGGAAGTGACTGGGGTCAAGGCTCGCAGGGCGCTCAGGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTATCCGAGGGCACTTGGTTAGGAGACAAGCTATTTCTACTTTATGTTGTATGCATGGGATCATCAAGTTACAAGCACTAGTTCGTGGTCGAAGAGTTAGGCAGTCTGAAGTTGGGTATGAAATGCATGGGAAGCATCAGGTTGACAAGTGCGGCAACTCAGTTGGGTTAACTGTAAAAATTGCAAATATGTCAGCAACTAGTTTTATCCTCAAGCTTCTTGCTTCATCGACTGCAACAACTGCTTTGCGTCTTCAATATCCTTCTGGTGATCCGAATGCTGTTCTAAGCTGGTTGGAGCGCTGGTCGGCGTCTCATTTTTGGAAACCAGTTCCCAAACCCAAGAAACTCCTAAACTCTATCTCAGAGAAAGATTGAAACCGAAACGAAACCTGCGAAAAGTTTCAAGCAAGCCCACAGATACACTGGAGGAAAATTCAGAAAATGAGTTTGAGAAAGGTTCATAACCCTGCTGTAGAGAATTCTGCTCAGCCAGAAGTTGAATCAGAGACTGTGAAGCAGCATTCAGAAAAGGCATCGGTTACCTCAGGTTATGATGTTTCAGATGAAGAGGTCAAAACTAGTTACAATGAGAAGATAAAAATGGATTCAACATTGACCATGTCCAATGAGCCTGATGGAGAAGGTAAACTTAGAATTTCAGTTAGCAAGGAGGATTCTAACATGCCCAATACTCAAGTGCCTACCGATTCGGTGCCCTTGAGAGAGAATTCAAGTAGATGTAAGAACAATTCTGGTGAAGAAGCTACCAAAGAGCTGAAAGATTCACGTGAGACTTGTAATGATGGACATTCTCCCTTAACAAATGGACATTTGAGTCTTAAGGAAGATTTGACAGGAAATGAAAACCAGAAACCAGGTCAGAAATCCCCGGTTCTAGCTAAGCAGGAACTTCTTGTAGAGGATGGTTTACAGAATAAGCCAAGTTCCACTTTACCGAGTTACATGGCAGCTACTGAATCTGCGAAAGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATAGTGGAGGTGAGAGAAGCAACCTTAGCAGGCGATATTCTCTGCCATCTTCGAATAACGGTAAGATTAGTTCGCATTCGCCAAGAACACGGAGACCAGCTCAAGCAGGAGGCAAAGGAGGACACAGGAGTGACAAAACAATGGGTTCTTCCACAGATGGTAATGTAAAGTGGATTGATATGCCAAATATGATGACTTCACTTACAGATTAA	1311	0.4325	MEVTGVKARRALRTLKGIIRLQALIRGHLVRRQAISTLCCMHGIIKLQALVRGRRVRQSEVGYEMHGKHQVDKCGNSVGLTVKIANMSATSFILKLLASSTATTALRLQYPSGDPNAVLSWLERWSASHFWKPVPKPKKLLNSISEKDXNRNETCEKFQASPQIHWRKIQKMSLRKVHNPAVENSAQPEVESETVKQHSEKASVTSGYDVSDEEVKTSYNEKIKMDSTLTMSNEPDGEGKLRISVSKEDSNMPNTQVPTDSVPLRENSSRCKNNSGEEATKELKDSRETCNDGHSPLTNGHLSLKEDLTGNENQKPGQKSPVLAKQELLVEDGLQNKPSSTLPSYMAATESAKAKLRAQGSPRLGQDSGGERSNLSRRYSLPSSNNGKISSHSPRTRRPAQAGGKGGHRSDKTMGSSTDGNVKWIDMPNMMTSLTD	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	333	347	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	179	436	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	247	270	-	-
	Acco04g2707	436	Pfam	IQ calmodulin-binding motif	44	58	IPR000048	GO:0005515
	Acco04g2707	436	Pfam	IQ calmodulin-binding motif	16	33	IPR000048	GO:0005515
	Acco04g2707	436	Pfam	Protein of unknown function (DUF4005)	320	410	IPR025064	-
	Acco04g2707	436	ProSiteProfiles	IQ motif profile.	16	43	IPR000048	GO:0005515
	Acco04g2707	436	PANTHER	IQ-DOMAIN 5-RELATED	5	390	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	411	436	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	199	213	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	292	320	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	271	291	-	-
	Acco04g2707	436	MobiDBLite	consensus disorder prediction	366	397	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco04g2707	Acco-ChrAcco04	43877430	43879630	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco04g2707	5	423	IQD Protein Family	AT1G74690	38.285	9.41e-74	240