Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2704 ATGGGACTCCTCACACGTCCACTGACAAATCTCGACTTTATTATCCTATGCGCTCAAGCCTACCGTATACTACACCCTGAACCGTTGATCAAACCATTCTTCATATCTACACCAATGTTCGTGAGGAACAATAGATTAGGGGTGAAGACAGGTTCTGCATTTGCCTGGTACTTGTTAGATCTAGCTCGAATTGACCTCGTTAAGTTTGATTTGAGAAAACTTGTTAAACAGAAAGAATCGCCGGTTGTTCCGAAGGCATCAGAAACTGAGTTCTCTTTTAATCCAACTCCCATTACTTTTCCTAGAAATGAGAGGGATCCGGAACTGGAAAATAAGGATCCAGAAGATCTTTGGTTGCAGAATCATGCCGATATTTCTGGATCTGATCATCAAGATGCCCCTTGTGATCCGGATAGAATTATGCAGGAGGAAGCTACAACAAAGGTGCAGGCTACTATACCTTATTTAGAGAAAAATAAGCAGGAGGAAGCTGCAATGACCATGCAGGCTACTTTACCTCCTGATCTAGACAAAATTAAGCAAGAGGAAGCTGCAATAAAGGTGCAAGCAACTTGCAGGGGCTATCTGGCTCGCAGGGCGTTCAGGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTATCCGAGGGCACTTGGTTAGGAGACAAGCTATTTCTACTTCATGTTGTATGTATGGGATAATCAAGTTACAAGCACTAGTTCGTGGTCGAAGAGTTAGGCAGTCTGAAGTTGGGTATGAAATGCATGGGAAGTGCAATGTTGTCAAGCATCAGGTTGACAAGTGCGGCAACTCAGTTGGGTTAACTGTAAAAATTGCAAATATGTCTGCAACTAGTTTTATCCGCAAGCTTCTTTCTTCATCAACTGCAACAACTGCTTTGCGTCTTCAATATCCTTCTGGTGATCCAAATGCTGCTCTAAGTTGGTTGGAGCGCTGGTCGGCGTCTCATTTCTGGAAACCAGTTCCCAAACCCAAGAAACTCCTAAACTCTAAATCTCAGAGAAAGATTGACTTGGTCTTAGTGCAAGAAAGTTCTGACTTTGAGAAACCGAAACGAAACCTGAGAACAGTTTCAAGCAAGGCCACAGATACACTGGAGGAAAATTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGCCTTAGAGAATTCTGCTCACCCAGAAGTTGAATCAGAGACTGTGAAGCAGCATTCAGAAAAGGCATCAGTTACCTCAGGTTATGATGTTTCGGAAGAAGAGGTCAAAACTAGTTACGATGAGAAGATAAAAATGGATTCAACATTGACCATGTCCAATGAGCCTGATGGAGGAGGTAAACTTAGAATTTCAGTTAGCAAGGAGGCTTCGAACATGCCCAATACTCAAGTGCCTACCGATTCGGTGCCCTTGAGAGAGAACACAAGTAGATGTAAGAACAATTCTGGTGAAGAAGCTACGAAAGAGCTAAAAGATTCACACGAGACTTGTAATGATGAACATTCTCCCTTAACAAATGGACATTTGAGTTTTAAGGAAGATTTGACAAGAAATGAAAACCAGAAACCGGGTCGGGATTCCCTGGTTCTAGCTAAGCAGGAACTTGTTGAGGATGGTTTACAGAATAGCCCAAGTCCCACTTTACCGAGTTACATGGCGGCTACTGAATCTGCGAAGGCAAAGTTGAGAGCACAAGCCCCAAGGTTAGGACAAGATAGTGGAGGTGAGAGAAGCAACCTTACCAGGCGACATTCTCTGCCATCTTCAAATAACGGTAAGATTAGTTCGCATTCGCCAAGAACACAGAGACCAGATCAAACAGGAGGCAAAAGAGGACACAGGAGTGACAAAACAAACAAAACAATGGGTTCTTCCAGAGATGGTAATGTAAAGTGA 1914 0.4295 MGLLTRPLTNLDFIILCAQAYRILHPEPLIKPFFISTPMFVRNNRLGVKTGSAFAWYLLDLARIDLVKFDLRKLVKQKESPVVPKASETEFSFNPTPITFPRNERDPELENKDPEDLWLQNHADISGSDHQDAPCDPDRIMQEEATTKVQATIPYLEKNKQEEAAMTMQATLPPDLDKIKQEEAAIKVQATCRGYLARRAFRTLKGIIRLQALIRGHLVRRQAISTSCCMYGIIKLQALVRGRRVRQSEVGYEMHGKCNVVKHQVDKCGNSVGLTVKIANMSATSFIRKLLSSSTATTALRLQYPSGDPNAALSWLERWSASHFWKPVPKPKKLLNSKSQRKIDLVLVQESSDFEKPKRNLRTVSSKATDTLEENSENEFEKVKRNLRKVHNPALENSAHPEVESETVKQHSEKASVTSGYDVSEEEVKTSYDEKIKMDSTLTMSNEPDGGGKLRISVSKEASNMPNTQVPTDSVPLRENTSRCKNNSGEEATKELKDSHETCNDEHSPLTNGHLSFKEDLTRNENQKPGRDSLVLAKQELVEDGLQNSPSPTLPSYMAATESAKAKLRAQAPRLGQDSGGERSNLTRRHSLPSSNNGKISSHSPRTQRPDQTGGKRGHRSDKTNKTMGSSRDGNVK 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2704 637 Pfam IQ calmodulin-binding motif 205 222 IPR000048 GO:0005515
Acco04g2704 637 Pfam IQ calmodulin-binding motif 183 202 IPR000048 GO:0005515
Acco04g2704 637 MobiDBLite consensus disorder prediction 544 558 - -
Acco04g2704 637 PANTHER IQ-DOMAIN 5-RELATED 151 601 - -
Acco04g2704 637 Pfam Protein of unknown function (DUF4005) 541 621 IPR025064 -
Acco04g2704 637 MobiDBLite consensus disorder prediction 460 518 - -
Acco04g2704 637 ProSiteProfiles IQ motif profile. 181 209 IPR000048 GO:0005515
Acco04g2704 637 ProSiteProfiles IQ motif profile. 205 227 IPR000048 GO:0005515
Acco04g2704 637 MobiDBLite consensus disorder prediction 392 428 - -
Acco04g2704 637 MobiDBLite consensus disorder prediction 578 609 - -
Acco04g2704 637 MobiDBLite consensus disorder prediction 460 483 - -
Acco04g2704 637 SMART iq_5 180 202 IPR000048 GO:0005515
Acco04g2704 637 SMART iq_5 203 224 IPR000048 GO:0005515
Acco04g2704 637 MobiDBLite consensus disorder prediction 543 637 - -
Acco04g2704 637 MobiDBLite consensus disorder prediction 484 507 - -
Acco04g2704 637 Gene3D - 179 228 - -
Acco04g2704 637 MobiDBLite consensus disorder prediction 610 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2704 Acco-ChrAcco04 43851226 43856373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2704 175 637 IQD Protein Family AT1G74690 40.202 6.10e-91 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2704 04 43851226 43856373 Acco13g0704 13 5186344 5192522 ECH
Acco04g2704 04 43851226 43856373 Acco04g2704 04 43851226 43856373 ECH