Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2700 ATGACGAAAGAAGAGCTTCAGAACGAAAATGATGACATGCTTATCGATGGATATGAACCTGAAGTGCCTGGGCAAAAGCAGAAAAGTCATGTTCCGAGCGAGTTCAATCCGGATCACCTTAAATTGTTTTACGGAAAGCTATTTCCTTATGCTGATTTGTTTAGATGGATATCTTATGGCAATGATGGGAAGCATCCGGGTTGTGATCCCTCTTACATCAGCCGGAGGGAATTTTCATTCTCGCTTGACAACGATATATTTCTACGATTCCAATCCTTCCACAGTGCTGCGGAGCTTGAAAAATCCATCAAAGAGAAATGCCCATTTAAGATCGATATCGGACCTGTGTACAGCGTGGAGCCCACAAAAAGGCATGCCTATGCTCAGAGTGGCGATAATGTTTTTGCTCCAGTTGAGAGAGAGCTAATTTTTGATATTGATATTACAGATTATGACGATGTTAGATACTGCTGCACTGGTGCTGATGTTTGCTTGAATTGCTGGCCACTGATGACTATAGCTATTAAAGTGATTGATACCGCCTTAAGAGATGATTTTGGCTTTAAACACATTCTATGGGTTTATAGCGGCCGCCGTGGTGTTCACTGTTGGGTCTGTGATGGGAAGGCAAGAAGGTTGACAAATGAGCAGAGAGCAGCGATTGCTGACTACTTTCGTGTCTACAAGGGAAACGAGAATAGTCATAAGAAGGTTTCATTGATGGGCCAAGCTCTTCATCCTTTCCTGGTGAGAGCATACACTGAAGTTCTTAAAGAGTTTTTTGAGAAAGGACTATTAATAAGTCAAACTTTACTTTCTACCGAAGAGAGATATGAGATGATCTTAGAGTTGATTCCAGATGCAGCTATTGCTTCGGAACTTAGGGGTAGATGGCAAGATAATAGGCGGTCTTCAAGTGCAAGAGAAGACATTAATGTTGTTCGATGGGAACAGCTCAAACATTTGGTGTCGAAGAATAAGGCACCAGGACTGCGAAGGTGTGTCGAAGAAATCGTGTTCTCTTTTACTTACCCTAGGCTAGATATGGAGGTTTCGAAGCACATGAATCACTTGCTTAAAGCTCCATTCTGTGTACACCCGAAAACAGGCCGCATTTGTGTCCCCATTGATCCAAATCACTGTGAGCAGTTTGATCCTACCGCAGTACCTACTCTTTCTCAGCTTTTAGAAGAGCTTAACGAAAGAGGTCCAAGTGATGATTTAGATGATGAATGGACGGGAACTTCACTTGAGGGCGCCGTCAGCTATTTCAGAACGTCATTCTTACAGCCTCTACTAAAATCTTGCAAGGAGGAGATAGAAAGTTCCTACAATGCAAAATTGCAGCAGTCAAAAAACTCTTTTAGCTGGTTTTCTGGTTTTTGGGTCCTAGTTCAATGTGGGGAGCTTCTCCACAAACGAAGATCAAGGCATTCAACCAGTTGTTAG 1449 0.4258 MTKEELQNENDDMLIDGYEPEVPGQKQKSHVPSEFNPDHLKLFYGKLFPYADLFRWISYGNDGKHPGCDPSYISRREFSFSLDNDIFLRFQSFHSAAELEKSIKEKCPFKIDIGPVYSVEPTKRHAYAQSGDNVFAPVERELIFDIDITDYDDVRYCCTGADVCLNCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSLMGQALHPFLVRAYTEVLKEFFEKGLLISQTLLSTEERYEMILELIPDAAIASELRGRWQDNRRSSSAREDINVVRWEQLKHLVSKNKAPGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRICVPIDPNHCEQFDPTAVPTLSQLLEELNERGPSDDLDDEWTGTSLEGAVSYFRTSFLQPLLKSCKEEIESSYNAKLQQSKNSFSWFSGFWVLVQCGELLHKRRSRHSTSC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2700 482 PANTHER DNA PRIMASE SMALL SUBUNIT 28 442 - -
Acco04g2700 482 SUPERFAMILY Prim-pol domain 35 401 - -
Acco04g2700 482 CDD AE_Prim_S 49 386 IPR014052 GO:0003896|GO:0006269
Acco04g2700 482 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 41 397 IPR014052 GO:0003896|GO:0006269
Acco04g2700 482 FunFam DNA primase 27 438 - -
Acco04g2700 482 Pfam DNA primase small subunit 144 377 IPR002755 GO:0003896|GO:0006269
Acco04g2700 482 Gene3D DNA primase, PRIM domain 26 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2700 Acco-ChrAcco04 43818410 43824356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2700 1 457 Core DNA Replication Machinery Family AT5G41880 63.261 0.0 628