Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2699 ATGGAGGTTGCTTTAGGAAGATCTGATCATGAAAGTAGAGTCAAAGAAGAGAAGACGACTGAATCCGTTGGCCCTGGTGATGAAGATCATCCAAAACAAGCGATTGATATTGAGGTGGAAAAGCTAGAAAGTGCAAAAACGGAAATGGGAGAGGCGAGAGAAGAAAACCAAAGGCTAAAGCATTGTTTGGATAGAGTTATGAAGGATTACAGGACACTTGAAATGAAATTCAAAGATATCTTTCAAAAAGAAACCAAACATCAATCCACTACTATTTGTTCTGAACCTGATGATTTAGTTTCGCTGCGCCTTGGAAGAGTTATTTGCAGCAATAACAACAAAAATAATGCAAGAACTAACGATGATGATCACCAGAAAAGCAAAGCTTTAGAAGCACTATTATTGAAGGATAATAATGGTGATGACGATGAAGAAGAGGACTTGGCTCTTGGATTGGACTGCAAATTTGAAACATCCAAGTCAGGAAGCATAACTACAAATAATAACAATGATTCACCAAATATATTGAATCCAAGCCCTACCAATAGTTCTCATCAAGAGCCAGTCAATAATGAAAGTAAAGCACTCAAGACAAGCGGAGATAGTTATTCAGGAGAAGACGAAGTTTCCCAACACAATCCTCCCAAGAGAGCTAGGGTTTGTGTCAGAGCAAGATGTGACGCTCCAACTATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAAATCTCTAAAGGAAATCCTTGTCCTAGAGCATATTATCGTTGTACAGTCGCACCCTCATGCCCCGTGAAAAAACAGGTGCAAAGATGTGCAGAGGATATGTCGGTTTTAGTTACAACTTACGAGGGAATCCACAACCACCCTCTTCCTCTCTCAGCCACCACCGTGGCTTCCACTACTTCCGCCGCAGCTTCCATGCTTTTGTCTGCTTCATCATCGTCTACTTCCGCCGCCGCATCCGCCACCACTCCGTTATATTTCTCCAATATTCCTTCTTCACTCTCATCATCATCATCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACTAACTCAGCAGCCTCAAGATTATTCATGACCTCATCCTCGTCGTCATCAAATTACAACCCACCTCCAAGATCATCATCATTCCGTTCTTCCACAAGTCTCAACTTTAGTTCCCCAAACAATAATAATTTTCTCAGCTATAATAGTAATAACATGAATCTTTTCAGCTCCATGAACCTTGCAAGGTCGACGACAATGGATAATAATATCTACAGGCTGCCTTACATGCAAAAGAACAGTGTTACCAATAAACCAACTCATCATCATCATCCTCCTCCTCCTCAACCTGCTGCTCTGCCGGATAGTATTGCGGCCGTCACCAAGGCCATAGCAGCGGACCCGAAGTTTCAGTCGGCTTTGGCGGTGGCGCTTAGTTCATTTATTGGCACAGGAGGAAGTGGTATTGGCAGCAGCAGCCAAGGCCAAGGCAATCATGGCGGCGCCGGAGAAAACTTGCCTCAGAAAGTGAAATGGGGGGAGCTGTTTCCAGCATTATGA 1557 0.4316 MEVALGRSDHESRVKEEKTTESVGPGDEDHPKQAIDIEVEKLESAKTEMGEAREENQRLKHCLDRVMKDYRTLEMKFKDIFQKETKHQSTTICSEPDDLVSLRLGRVICSNNNKNNARTNDDDHQKSKALEALLLKDNNGDDDEEEDLALGLDCKFETSKSGSITTNNNNDSPNILNPSPTNSSHQEPVNNESKALKTSGDSYSGEDEVSQHNPPKRARVCVRARCDAPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVKKQVQRCAEDMSVLVTTYEGIHNHPLPLSATTVASTTSAAASMLLSASSSSTSAAASATTPLYFSNIPSSLSSSSSLPSHPTITLDLTTNSAASRLFMTSSSSSSNYNPPPRSSSFRSSTSLNFSSPNNNNFLSYNSNNMNLFSSMNLARSTTMDNNIYRLPYMQKNSVTNKPTHHHHPPPPQPAALPDSIAAVTKAIAADPKFQSALAVALSSFIGTGGSGIGSSSQGQGNHGGAGENLPQKVKWGELFPAL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2699 518 MobiDBLite consensus disorder prediction 364 386 - -
Acco04g2699 518 Gene3D WRKY domain 216 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g2699 518 Coils Coil 35 62 - -
Acco04g2699 518 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 490 IPR044810 GO:0003700
Acco04g2699 518 SMART WRKY_cls 231 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g2699 518 FunFam probable WRKY transcription factor 31 216 293 - -
Acco04g2699 518 SUPERFAMILY WRKY DNA-binding domain 224 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco04g2699 518 MobiDBLite consensus disorder prediction 1 33 - -
Acco04g2699 518 MobiDBLite consensus disorder prediction 433 452 - -
Acco04g2699 518 ProSiteProfiles WRKY domain profile. 226 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g2699 518 MobiDBLite consensus disorder prediction 162 209 - -
Acco04g2699 518 Pfam WRKY DNA -binding domain 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco04g2699 518 MobiDBLite consensus disorder prediction 487 507 - -
Acco04g2699 518 MobiDBLite consensus disorder prediction 162 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2699 Acco-ChrAcco04 43793163 43796796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2699 41 482 WRKY Transcription Factor Family AT1G18860 38.856 5.60e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco04g2699 WRKY 3.1e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2699 04 43793163 43796796 Acco13g0700 13 5143533 5147452 ECH
Acco04g2699 04 43793163 43796796 Acco04g2699 04 43793163 43796796 ECH